RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 TTLL12Q14166 644 aaPredicted RBP20.9■□□□□ 0.94
DDB1-215ENST00000539712 RASA3Q14644 834 aa20.9■□□□□ 0.94
DDB1-215ENST00000539712 NBPF12Q5TAG4 269 aaPredicted RBP20.9■□□□□ 0.94
DDB1-215ENST00000539712 VEZTQ9HBM0 779 aa20.9■□□□□ 0.94
DDB1-215ENST00000539712 RNF186Q9NXI6 227 aa20.9■□□□□ 0.94
DDB1-215ENST00000539712 ZBED9Q6R2W3 1325 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 SRGAP3O43295 1099 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 FRAT2O75474 233 aaPredicted RBP20.89■□□□□ 0.93
DDB1-215ENST00000539712 CAPN15O75808 1086 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 MAP3K11Q16584 847 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 ATP2B3Q16720 1220 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 TMEM57Q8N5G2 664 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 MRIQ9BWK5 157 aa20.89■□□□□ 0.93
DDB1-215ENST00000539712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.89■□□□□ 0.93
DDB1-215ENST00000539712 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
DDB1-215ENST00000539712 ARMC9Q7Z3E5 817 aa20.88■□□□□ 0.93
DDB1-215ENST00000539712 CDAN1Q8IWY9 1227 aa20.88■□□□□ 0.93
DDB1-215ENST00000539712 TEPSINQ96N21 525 aa20.88■□□□□ 0.93
DDB1-215ENST00000539712 SAGE1Q9NXZ1 904 aa20.88■□□□□ 0.93
DDB1-215ENST00000539712 ANGEL1Q9UNK9 670 aaKnown RBP20.88■□□□□ 0.93
DDB1-215ENST00000539712 CASP8AP2Q9UKL3 1982 aa20.87■□□□□ 0.93
DDB1-215ENST00000539712 ADORA1P30542 326 aa20.87■□□□□ 0.93
DDB1-215ENST00000539712 APOBEC3HQ6NTF7 200 aaKnown RBP20.87■□□□□ 0.93
DDB1-215ENST00000539712 SUGT1Q9Y2Z0 365 aa20.87■□□□□ 0.93
DDB1-215ENST00000539712 PNMA6EA0A0J9YXQ4 647 aa20.86■□□□□ 0.93
DDB1-215ENST00000539712 ZBTB22O15209 634 aa20.86■□□□□ 0.93
DDB1-215ENST00000539712 TRPA1O75762 1119 aa20.86■□□□□ 0.93
DDB1-215ENST00000539712 GNAI2P04899 355 aa20.86■□□□□ 0.93
DDB1-215ENST00000539712 PHKA1P46020 1223 aa20.86■□□□□ 0.93
DDB1-215ENST00000539712 ZDHHC15Q96MV8 337 aa20.86■□□□□ 0.93
DDB1-215ENST00000539712 USP2O75604 605 aaPredicted RBP20.85■□□□□ 0.93
DDB1-215ENST00000539712 RLBP1P12271 317 aa20.85■□□□□ 0.93
DDB1-215ENST00000539712 TIMM10P62072 90 aa20.85■□□□□ 0.93
DDB1-215ENST00000539712 SUPT20HL1Q3ZLR7 823 aa20.85■□□□□ 0.93
DDB1-215ENST00000539712 REM2Q8IYK8 340 aaPredicted RBP20.85■□□□□ 0.93
DDB1-215ENST00000539712 WDR66Q8TBY9 1149 aa20.85■□□□□ 0.93
DDB1-215ENST00000539712 TEKT1Q969V4 418 aa20.85■□□□□ 0.93
DDB1-215ENST00000539712 CLMNQ96JQ2 1002 aa20.85■□□□□ 0.93
DDB1-215ENST00000539712 TM4SF4P48230 202 aa20.84■□□□□ 0.93
DDB1-215ENST00000539712 TFCP2Q12800 502 aa20.84■□□□□ 0.93
DDB1-215ENST00000539712 SPRYD7Q5W111 196 aa20.84■□□□□ 0.93
DDB1-215ENST00000539712 HHIPL2Q6UWX4 724 aa20.84■□□□□ 0.93
DDB1-215ENST00000539712 TMEM39BQ9GZU3 492 aa20.84■□□□□ 0.93
DDB1-215ENST00000539712 AKAP11Q9UKA4 1901 aa20.83■□□□□ 0.93
DDB1-215ENST00000539712 TCP10L2B9ZVM9 353 aa20.83■□□□□ 0.93
DDB1-215ENST00000539712 PPP1R12BO60237 982 aaPredicted RBP20.83■□□□□ 0.93
DDB1-215ENST00000539712 CACNB3P54284 484 aa20.83■□□□□ 0.93
DDB1-215ENST00000539712 MKRN3Q13064 507 aaKnown RBP20.83■□□□□ 0.93
DDB1-215ENST00000539712 TNFAIP1Q13829 316 aa20.83■□□□□ 0.93
DDB1-215ENST00000539712 CCDC102BQ68D86 513 aa20.83■□□□□ 0.93
DDB1-215ENST00000539712 ABHD8Q96I13 439 aa20.82■□□□□ 0.92
DDB1-215ENST00000539712 SALL1Q9NSC2 1324 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 A0A1B0GUL7 405 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 UNCXA6NJT0 531 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 SEMA3EO15041 775 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 PRDX5P30044 214 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 POLA2Q14181 598 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 SLC10A4Q96EP9 437 aa20.81■□□□□ 0.92
DDB1-215ENST00000539712 GNL3LQ9NVN8 582 aaKnown RBP20.81■□□□□ 0.92
DDB1-215ENST00000539712 MAST3O60307 1309 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 MYH13Q9UKX3 1938 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 ZBTB7BO15156 539 aaPredicted RBP20.8■□□□□ 0.92
DDB1-215ENST00000539712 RASGRF1Q13972 1273 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 DIXDC1Q155Q3 683 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 FKBP1CQ5VVH2 108 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 XAGE2Q96GT9 111 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 DENND2AQ9ULE3 1009 aa20.8■□□□□ 0.92
DDB1-215ENST00000539712 GJA5P36382 358 aa20.79■□□□□ 0.92
DDB1-215ENST00000539712 WNK4Q96J92 1243 aa20.79■□□□□ 0.92
DDB1-215ENST00000539712 DAGLAQ9Y4D2 1042 aa20.79■□□□□ 0.92
DDB1-215ENST00000539712 IREB2P48200 963 aaKnown RBP20.78■□□□□ 0.92
DDB1-215ENST00000539712 ATP8B2P98198 1209 aa20.78■□□□□ 0.92
DDB1-215ENST00000539712 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.78■□□□□ 0.92
DDB1-215ENST00000539712 FAM83AQ86UY5 434 aa20.78■□□□□ 0.92
DDB1-215ENST00000539712 SSH3Q8TE77 659 aa20.78■□□□□ 0.92
DDB1-215ENST00000539712 AKAP2Q9Y2D5 859 aa20.78■□□□□ 0.92
DDB1-215ENST00000539712 TNNI2P48788 182 aa20.77■□□□□ 0.92
DDB1-215ENST00000539712 CDC42EP5Q6NZY7 148 aa20.77■□□□□ 0.92
DDB1-215ENST00000539712 MCOLN1Q9GZU1 580 aa20.77■□□□□ 0.92
DDB1-215ENST00000539712 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.92
DDB1-215ENST00000539712 C1orf115Q9H7X2 142 aa20.77■□□□□ 0.92
DDB1-215ENST00000539712 PDS5AQ29RF7 1337 aaKnown RBP20.77■□□□□ 0.91
DDB1-215ENST00000539712 TBC1D8O95759 1140 aa20.76■□□□□ 0.91
DDB1-215ENST00000539712 LDHBP07195 334 aaKnown RBP20.76■□□□□ 0.91
DDB1-215ENST00000539712 ZBTB48P10074 688 aaPredicted RBP20.76■□□□□ 0.91
DDB1-215ENST00000539712 FTSJ3Q8IY81 847 aaKnown RBP20.76■□□□□ 0.91
DDB1-215ENST00000539712 ANKRD13AQ8IZ07 590 aa20.76■□□□□ 0.91
DDB1-215ENST00000539712 PIAS4Q8N2W9 510 aaPredicted RBP20.76■□□□□ 0.91
DDB1-215ENST00000539712 OTOFQ9HC10 1997 aa20.76■□□□□ 0.91
DDB1-215ENST00000539712 SREBF2Q12772 1141 aa20.75■□□□□ 0.91
DDB1-215ENST00000539712 G3BP1Q13283 466 aaKnown RBP eCLIP20.75■□□□□ 0.911e-8■■■□□ 15.5
DDB1-215ENST00000539712 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
DDB1-215ENST00000539712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDB1-215ENST00000539712 PANK1Q8TE04 598 aa20.75■□□□□ 0.91
DDB1-215ENST00000539712 CFHR5Q9BXR6 569 aa20.75■□□□□ 0.91
DDB1-215ENST00000539712 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.75■□□□□ 0.91
DDB1-215ENST00000539712 NFIAQ12857 509 aa20.74■□□□□ 0.91
DDB1-215ENST00000539712 DGKZQ13574 1117 aa20.74■□□□□ 0.91
DDB1-215ENST00000539712 MVPQ14764 893 aaKnown RBP20.74■□□□□ 0.91
DDB1-215ENST00000539712 ZNF384Q8TF68 577 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms