RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ATP6V0A2Q9Y487 856 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 XDHP47989 1333 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 UQCRFS1P1P0C7P4 283 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 ALDH1B1P30837 517 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 KCNJ4P48050 445 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 CWC27Q6UX04 472 aaKnown RBP11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 TBC1D16Q8TBP0 767 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 LEMD3Q9Y2U8 911 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
RTN4IP1-204ENST00000539449 ZNF541Q9H0D2 1346 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 A0A0D9SFI3 127 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 UFL1O94874 794 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 ATP2B4P23634 1241 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 PRPF40BQ6NWY9 871 aaKnown RBP11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 C7orf43Q8WVR3 580 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 USP26Q9BXU7 913 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 PODXL2Q9NZ53 605 aa11.1□□□□□ -0.63
RTN4IP1-204ENST00000539449 SGSM2O43147 1006 aa11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 HIBADHP31937 336 aaKnown RBP11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 CST9Q5W186 159 aa11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 C15orf52Q6ZUT6 534 aaKnown RBP11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 TMC4Q7Z404 712 aa11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 DIAPH3Q9NSV4 1193 aa11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 GGA1Q9UJY5 639 aa11.09□□□□□ -0.63
RTN4IP1-204ENST00000539449 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 PTH1RQ03431 593 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 CASC1Q6TDU7 716 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 CCDC129Q6ZRS4 1044 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 MPNDQ8N594 471 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 CNKSR1Q969H4 720 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 TBC1D32Q96NH3 1257 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 C22orf23Q9BZE7 217 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 JAG2Q9Y219 1238 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
RTN4IP1-204ENST00000539449 M0R2C6 588 aa11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 RNF113AO15541 343 aaKnown RBP11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 CIAPIN1Q6FI81 312 aa11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZNF589Q86UQ0 364 aaPredicted RBP11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 TDRD7Q8NHU6 1098 aaKnown RBP11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 LSG1Q9H089 658 aaKnown RBP11.07□□□□□ -0.64
RTN4IP1-204ENST00000539449 RFX7Q2KHR2 1363 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 MED23Q9ULK4 1368 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 TRAF5O00463 557 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 DLL1O00548 723 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 ADD2P35612 726 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 GRIK5Q16478 980 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 SOGA3Q5TF21 947 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 DPP8Q6V1X1 898 aaPredicted RBP11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 VPS37DQ86XT2 251 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 OSBP2Q969R2 916 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 KIF2CQ99661 725 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 CD209Q9NNX6 404 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 GNL3LQ9NVN8 582 aaKnown RBP11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZNF646O15015 1829 aaPredicted RBP11.06□□□□□ -0.64
RTN4IP1-204ENST00000539449 SCN9AQ15858 1988 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 HIP1O00291 1037 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 IDH1O75874 414 aaKnown RBP11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 RBM25P49756 843 aaKnown RBP11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 SAPCD2Q86UD0 394 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZNF384Q8TF68 577 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 PALD1Q9ULE6 856 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 MAST3O60307 1309 aa11.05□□□□□ -0.64
RTN4IP1-204ENST00000539449 SEMA3EO15041 775 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZBTB22O15209 634 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 REC8O95072 547 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 IL1R1P14778 569 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 PDE6AP16499 860 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 MCMDC2Q4G0Z9 681 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZNF804AQ7Z570 1209 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 PUS7LQ9H0K6 701 aaKnown RBP11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZNF532Q9HCE3 1301 aa11.04□□□□□ -0.64
RTN4IP1-204ENST00000539449 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 ADGRA1Q86SQ6 560 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 GPC2Q8N158 579 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 APPBP2Q92624 585 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 RTFDC1Q9BY42 306 aaPredicted RBP11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 KCNQ5Q9NR82 932 aa11.03□□□□□ -0.64
RTN4IP1-204ENST00000539449 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms