RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SSC5DA1L4H1 1573 aa23.75■■□□□ 1.39
TNFRSF1A-212ENST00000539372 GNAI3P08754 354 aa23.75■■□□□ 1.39
TNFRSF1A-212ENST00000539372 RASA3Q14644 834 aa23.75■■□□□ 1.39
TNFRSF1A-212ENST00000539372 SPDYE2Q495Y8 402 aa23.75■■□□□ 1.39
TNFRSF1A-212ENST00000539372 SAGE1Q9NXZ1 904 aa23.75■■□□□ 1.39
TNFRSF1A-212ENST00000539372 FBXO3Q9UK99 471 aa23.75■■□□□ 1.39
TNFRSF1A-212ENST00000539372 ATP2B3Q16720 1220 aa23.74■■□□□ 1.39
TNFRSF1A-212ENST00000539372 NBPF12Q5TAG4 269 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF1A-212ENST00000539372 IL15P40933 162 aaPredicted RBP23.73■■□□□ 1.39
TNFRSF1A-212ENST00000539372 LDLRAD1Q5T700 205 aa23.73■■□□□ 1.39
TNFRSF1A-212ENST00000539372 COPRSQ9NQ92 184 aa23.73■■□□□ 1.39
TNFRSF1A-212ENST00000539372 TCP10L2B9ZVM9 353 aa23.72■■□□□ 1.39
TNFRSF1A-212ENST00000539372 SRGAP3O43295 1099 aa23.72■■□□□ 1.39
TNFRSF1A-212ENST00000539372 SUPT20HL1Q3ZLR7 823 aa23.72■■□□□ 1.39
TNFRSF1A-212ENST00000539372 REM2Q8IYK8 340 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF1A-212ENST00000539372 ABHD8Q96I13 439 aa23.72■■□□□ 1.39
TNFRSF1A-212ENST00000539372 CASP8AP2Q9UKL3 1982 aa23.72■■□□□ 1.39
TNFRSF1A-212ENST00000539372 PPP1R12BO60237 982 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF1A-212ENST00000539372 TNFAIP1Q13829 316 aa23.71■■□□□ 1.39
TNFRSF1A-212ENST00000539372 TEKT1Q969V4 418 aa23.71■■□□□ 1.39
TNFRSF1A-212ENST00000539372 HDLBPQ00341 1268 aaKnown RBP23.7■■□□□ 1.38
TNFRSF1A-212ENST00000539372 ZKSCAN2Q63HK3 967 aa23.7■■□□□ 1.38
TNFRSF1A-212ENST00000539372 CLMNQ96JQ2 1002 aa23.7■■□□□ 1.38
TNFRSF1A-212ENST00000539372 AKAP11Q9UKA4 1901 aa23.69■■□□□ 1.38
TNFRSF1A-212ENST00000539372 MAP3K11Q16584 847 aa23.69■■□□□ 1.38
TNFRSF1A-212ENST00000539372 CDAN1Q8IWY9 1227 aa23.69■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TMEM57Q8N5G2 664 aa23.69■■□□□ 1.38
TNFRSF1A-212ENST00000539372 WDR66Q8TBY9 1149 aa23.69■■□□□ 1.38
TNFRSF1A-212ENST00000539372 GNAI2P04899 355 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 ADORA1P30542 326 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 PHKA1P46020 1223 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 CACNB3P54284 484 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 SPRYD7Q5W111 196 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 SLC10A4Q96EP9 437 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TMEM39BQ9GZU3 492 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 GNL3LQ9NVN8 582 aaKnown RBP23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 SUGT1Q9Y2Z0 365 aa23.68■■□□□ 1.38
TNFRSF1A-212ENST00000539372 MAST3O60307 1309 aa23.67■■□□□ 1.38
TNFRSF1A-212ENST00000539372 USP2O75604 605 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF1A-212ENST00000539372 MTX1Q13505 466 aa23.67■■□□□ 1.38
TNFRSF1A-212ENST00000539372 ZDHHC15Q96MV8 337 aa23.67■■□□□ 1.38
TNFRSF1A-212ENST00000539372 IREB2P48200 963 aaKnown RBP23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TM4SF4P48230 202 aa23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TFCP2Q12800 502 aa23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 DGKZQ13574 1117 aa23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 APOBEC3HQ6NTF7 200 aaKnown RBP23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TEPSINQ96N21 525 aa23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 MRIQ9BWK5 157 aa23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 MCOLN1Q9GZU1 580 aa23.66■■□□□ 1.38
TNFRSF1A-212ENST00000539372 ZBED9Q6R2W3 1325 aa23.65■■□□□ 1.38
TNFRSF1A-212ENST00000539372 MYH13Q9UKX3 1938 aa23.65■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TNNI2P48788 182 aa23.65■■□□□ 1.38
TNFRSF1A-212ENST00000539372 TIMM10P62072 90 aa23.65■■□□□ 1.38
TNFRSF1A-212ENST00000539372 PNMA6EA0A0J9YXQ4 647 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 TBC1D8O95759 1140 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 PRDX5P30044 214 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 SREBF2Q12772 1141 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 CCDC102BQ68D86 513 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 HHIPL2Q6UWX4 724 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 WNK4Q96J92 1243 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 TMOD2Q9NZR1 351 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 DENND2AQ9ULE3 1009 aa23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF1A-212ENST00000539372 DIXDC1Q155Q3 683 aa23.63■■□□□ 1.37
TNFRSF1A-212ENST00000539372 FTSJ3Q8IY81 847 aaKnown RBP23.63■■□□□ 1.37
TNFRSF1A-212ENST00000539372 A0A1B0GUL7 405 aa23.62■■□□□ 1.37
TNFRSF1A-212ENST00000539372 CCDC85CA6NKD9 419 aa23.62■■□□□ 1.37
TNFRSF1A-212ENST00000539372 ANKRD13AQ8IZ07 590 aa23.62■■□□□ 1.37
TNFRSF1A-212ENST00000539372 AKAP2Q9Y2D5 859 aa23.62■■□□□ 1.37
TNFRSF1A-212ENST00000539372 SEMA3EO15041 775 aa23.61■■□□□ 1.37
TNFRSF1A-212ENST00000539372 LDHBP07195 334 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-212ENST00000539372 XAGE2Q96GT9 111 aa23.61■■□□□ 1.37
TNFRSF1A-212ENST00000539372 DAGLAQ9Y4D2 1042 aa23.61■■□□□ 1.37
TNFRSF1A-212ENST00000539372 UNCXA6NJT0 531 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 ZBTB48P10074 688 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 RLBP1P12271 317 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 GJA5P36382 358 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 ITPRIPQ8IWB1 547 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 NEUROD6Q96NK8 337 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 C1orf115Q9H7X2 142 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 ELP3Q9H9T3 547 aa23.6■■□□□ 1.37
TNFRSF1A-212ENST00000539372 SALL1Q9NSC2 1324 aa23.59■■□□□ 1.37
TNFRSF1A-212ENST00000539372 MANSC4A6NHS7 340 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF1A-212ENST00000539372 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.37
TNFRSF1A-212ENST00000539372 RASGRF1Q13972 1273 aa23.59■■□□□ 1.37
TNFRSF1A-212ENST00000539372 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF1A-212ENST00000539372 FAM83AQ86UY5 434 aa23.58■■□□□ 1.37
TNFRSF1A-212ENST00000539372 OTOFQ9HC10 1997 aa23.58■■□□□ 1.36
TNFRSF1A-212ENST00000539372 MAP3K9P80192 1104 aa23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 MVPQ14764 893 aaKnown RBP23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 FKBP1CQ5VVH2 108 aa23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 CDC42EP5Q6NZY7 148 aa23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 IFNL1Q8IU54 200 aa23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ZNF296Q8WUU4 475 aaPredicted RBP23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 OPTNQ96CV9 577 aa23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 R3HDMLQ9H3Y0 253 aa23.57■■□□□ 1.36
TNFRSF1A-212ENST00000539372 VGLL4Q14135 290 aa23.56■■□□□ 1.36
TNFRSF1A-212ENST00000539372 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.56■■□□□ 1.36
TNFRSF1A-212ENST00000539372 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ABCF2Q9UG63 623 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms