RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 TMEM39BQ9GZU3 492 aa18.64■□□□□ 0.57
CCDC144NL-202ENST00000539177 PRKRIP1Q9H875 184 aaPredicted RBP18.64■□□□□ 0.57
CCDC144NL-202ENST00000539177 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
CCDC144NL-202ENST00000539177 CEP290O15078 2479 aa18.63■□□□□ 0.57
CCDC144NL-202ENST00000539177 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
CCDC144NL-202ENST00000539177 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
CCDC144NL-202ENST00000539177 H0YGN5 161 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 GTF2A2P52657 109 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 LMBR1LQ6UX01 489 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 CNNM1Q9NRU3 951 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 CSADQ9Y600 493 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 AK9Q5TCS8 1911 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 MYH13Q9UKX3 1938 aa18.62■□□□□ 0.57
CCDC144NL-202ENST00000539177 FAM205AQ6ZU69 1335 aa18.61■□□□□ 0.57
CCDC144NL-202ENST00000539177 GYG1P46976 350 aa18.61■□□□□ 0.57
CCDC144NL-202ENST00000539177 MAP3K9P80192 1104 aa18.61■□□□□ 0.57
CCDC144NL-202ENST00000539177 LDHAL6AQ6ZMR3 332 aa18.61■□□□□ 0.57
CCDC144NL-202ENST00000539177 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
CCDC144NL-202ENST00000539177 F6X3S4 739 aa18.6■□□□□ 0.57
CCDC144NL-202ENST00000539177 CCDC57Q2TAC2 916 aa18.6■□□□□ 0.57
CCDC144NL-202ENST00000539177 EPHA10Q5JZY3 1008 aa18.6■□□□□ 0.57
CCDC144NL-202ENST00000539177 SERPINA10Q9UK55 444 aa18.6■□□□□ 0.57
CCDC144NL-202ENST00000539177 MGAMO43451 1857 aa18.59■□□□□ 0.57
CCDC144NL-202ENST00000539177 CRKP46108 304 aa18.59■□□□□ 0.57
CCDC144NL-202ENST00000539177 TNNI2P48788 182 aa18.59■□□□□ 0.57
CCDC144NL-202ENST00000539177 CACNB3P54284 484 aa18.59■□□□□ 0.57
CCDC144NL-202ENST00000539177 CHRDL2Q6WN34 429 aa18.59■□□□□ 0.57
CCDC144NL-202ENST00000539177 TDRD7Q8NHU6 1098 aaKnown RBP18.59■□□□□ 0.57
CCDC144NL-202ENST00000539177 LACTBP83111 547 aaPredicted RBP18.58■□□□□ 0.56
CCDC144NL-202ENST00000539177 KIF22Q14807 665 aa18.58■□□□□ 0.56
CCDC144NL-202ENST00000539177 GRIK5Q16478 980 aa18.58■□□□□ 0.56
CCDC144NL-202ENST00000539177 IQSEC3Q9UPP2 1182 aaPredicted RBP18.58■□□□□ 0.56
CCDC144NL-202ENST00000539177 SNCAIPQ9Y6H5 919 aa18.58■□□□□ 0.56
CCDC144NL-202ENST00000539177 SPDYE5A6NIY4 337 aa18.57■□□□□ 0.56
CCDC144NL-202ENST00000539177 BTBD19C9JJ37 291 aa18.57■□□□□ 0.56
CCDC144NL-202ENST00000539177 TLR2O60603 784 aa18.57■□□□□ 0.56
CCDC144NL-202ENST00000539177 WDHD1O75717 1129 aaPredicted RBP18.57■□□□□ 0.56
CCDC144NL-202ENST00000539177 HIBADHP31937 336 aaKnown RBP18.57■□□□□ 0.56
CCDC144NL-202ENST00000539177 WWC1Q8IX03 1113 aa18.57■□□□□ 0.56
CCDC144NL-202ENST00000539177 CETPP11597 493 aa18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 MTFR1Q15390 333 aa18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 BEND3Q5T5X7 828 aa18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 ZKSCAN4Q969J2 545 aaPredicted RBP18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 SHISA4Q96DD7 197 aa18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 FAM84BQ96KN1 310 aaPredicted RBP18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 WRNIP1Q96S55 665 aa18.56■□□□□ 0.56
CCDC144NL-202ENST00000539177 FANCIQ9NVI1 1328 aa18.55■□□□□ 0.56
CCDC144NL-202ENST00000539177 DPF3Q92784 378 aa18.55■□□□□ 0.56
CCDC144NL-202ENST00000539177 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
CCDC144NL-202ENST00000539177 IRF6O14896 467 aa18.54■□□□□ 0.56
CCDC144NL-202ENST00000539177 UBE4AQ14139 1066 aa18.54■□□□□ 0.56
CCDC144NL-202ENST00000539177 ERO1BQ86YB8 467 aa18.54■□□□□ 0.56
CCDC144NL-202ENST00000539177 SZT2Q5T011 3432 aa18.54■□□□□ 0.56
CCDC144NL-202ENST00000539177 GRM8O00222 908 aa18.53■□□□□ 0.56
CCDC144NL-202ENST00000539177 CTGFP29279 349 aa18.53■□□□□ 0.56
CCDC144NL-202ENST00000539177 SNAPC2Q13487 334 aa18.53■□□□□ 0.56
CCDC144NL-202ENST00000539177 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
CCDC144NL-202ENST00000539177 RBM27Q9P2N5 1060 aaKnown RBP18.53■□□□□ 0.56
CCDC144NL-202ENST00000539177 CPA4Q9UI42 421 aa18.53■□□□□ 0.56
CCDC144NL-202ENST00000539177 VAMP4O75379 141 aa18.52■□□□□ 0.56
CCDC144NL-202ENST00000539177 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
CCDC144NL-202ENST00000539177 VPS37DQ86XT2 251 aa18.52■□□□□ 0.56
CCDC144NL-202ENST00000539177 IL16Q14005 1332 aa18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 PSMC4P43686 418 aa18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 PRMT2P55345 433 aa18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 PPIL2Q13356 520 aa18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 TEKT1Q969V4 418 aa18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 ZCCHC17Q9NP64 241 aaKnown RBP18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 TMOD2Q9NZR1 351 aa18.51■□□□□ 0.55
CCDC144NL-202ENST00000539177 GNRH1P01148 92 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 OSBPP22059 807 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 C17orf99Q6UX52 265 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 MIGA2Q7L4E1 593 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 RAET1EQ8TD07 263 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 SUCLG2Q96I99 432 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
CCDC144NL-202ENST00000539177 DOCK2Q92608 1830 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 FMNL1O95466 1100 aaPredicted RBP18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 INPP5BP32019 993 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 GRK4P32298 578 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 SLC4A10Q6U841 1118 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 SRRDQ9UH36 339 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 ALPK3Q96L96 1907 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 MYPNQ86TC9 1320 aa18.49■□□□□ 0.55
CCDC144NL-202ENST00000539177 PDHXO00330 501 aa18.48■□□□□ 0.55
CCDC144NL-202ENST00000539177 FBXO33Q7Z6M2 555 aa18.48■□□□□ 0.55
CCDC144NL-202ENST00000539177 TBC1D22AQ8WUA7 517 aa18.48■□□□□ 0.55
CCDC144NL-202ENST00000539177 RIPOR2Q9Y4F9 1068 aa18.48■□□□□ 0.55
CCDC144NL-202ENST00000539177 MROH5Q6ZUA9 1318 aa18.48■□□□□ 0.55
CCDC144NL-202ENST00000539177 CCL5P13501 91 aa18.47■□□□□ 0.55
CCDC144NL-202ENST00000539177 HDLBPQ00341 1268 aaKnown RBP18.47■□□□□ 0.55
CCDC144NL-202ENST00000539177 PPATQ06203 517 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms