RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 LDHCP07864 332 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 CYP7A1P22680 504 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 GTF2IP78347 998 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 MFSD14BQ5SR56 506 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 LARGE2Q8N3Y3 721 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 DBNDD1Q9H9R9 158 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
VAMP1-207ENST00000539047 GNAT2P19087 354 aa18.46■□□□□ 0.55
VAMP1-207ENST00000539047 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
VAMP1-207ENST00000539047 NIM1KQ8IY84 436 aa18.46■□□□□ 0.55
VAMP1-207ENST00000539047 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
VAMP1-207ENST00000539047 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
VAMP1-207ENST00000539047 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
VAMP1-207ENST00000539047 M0R2C6 588 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 GPAA1O43292 621 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
VAMP1-207ENST00000539047 MECOMQ03112 1051 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 TTLL5Q6EMB2 1281 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
VAMP1-207ENST00000539047 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
VAMP1-207ENST00000539047 DSCC1Q9BVC3 393 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 LTBP3Q9NS15 1303 aa18.45■□□□□ 0.54
VAMP1-207ENST00000539047 ZNF646O15015 1829 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-207ENST00000539047 LAMA4Q16363 1823 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 TCRBV5S4A2TA0A5A2 114 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-207ENST00000539047 PRDX5P30044 214 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 FKBP1AP62942 108 aaKnown RBP18.44■□□□□ 0.54
VAMP1-207ENST00000539047 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 IL25Q9H293 177 aa18.44■□□□□ 0.54
VAMP1-207ENST00000539047 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-207ENST00000539047 SCN9AQ15858 1988 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 USP17L3A6NCW0 530 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 USP17L4A6NCW7 530 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 MBD4O95243 580 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 ANAPC15P60006 121 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 STRIP1Q5VSL9 837 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 USP17L1Q7RTZ2 530 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 NSUN4Q96CB9 384 aaKnown RBP18.43■□□□□ 0.54
VAMP1-207ENST00000539047 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
VAMP1-207ENST00000539047 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
VAMP1-207ENST00000539047 MYO3BQ8WXR4 1341 aa18.43■□□□□ 0.54
VAMP1-207ENST00000539047 BAG3O95817 575 aa18.42■□□□□ 0.54
VAMP1-207ENST00000539047 ZNF784Q8NCA9 323 aaPredicted RBP18.42■□□□□ 0.54
VAMP1-207ENST00000539047 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
VAMP1-207ENST00000539047 NACAP1Q9BZK3 213 aa18.42■□□□□ 0.54
VAMP1-207ENST00000539047 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
VAMP1-207ENST00000539047 DICER1Q9UPY3 1922 aaKnown RBP18.41■□□□□ 0.54
VAMP1-207ENST00000539047 CHGBP05060 677 aa18.41■□□□□ 0.54
VAMP1-207ENST00000539047 APPP05067 770 aa18.41■□□□□ 0.54
VAMP1-207ENST00000539047 HSPA4P34932 840 aa18.41■□□□□ 0.54
VAMP1-207ENST00000539047 PTH1RQ03431 593 aa18.41■□□□□ 0.54
VAMP1-207ENST00000539047 SLFNL1Q499Z3 407 aa18.41■□□□□ 0.54
VAMP1-207ENST00000539047 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
VAMP1-207ENST00000539047 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
VAMP1-207ENST00000539047 PLCG2P16885 1265 aa18.4■□□□□ 0.54
VAMP1-207ENST00000539047 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
VAMP1-207ENST00000539047 IL27Q8NEV9 243 aa18.4■□□□□ 0.54
VAMP1-207ENST00000539047 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
VAMP1-207ENST00000539047 ZNRF3Q9ULT6 936 aa18.4■□□□□ 0.54
VAMP1-207ENST00000539047 MROH7-TTC4A0A0A0MT08 1334 aa18.4■□□□□ 0.54
VAMP1-207ENST00000539047 LAMB1P07942 1786 aa18.4■□□□□ 0.54
VAMP1-207ENST00000539047 KRT32Q14532 448 aa18.39■□□□□ 0.53
VAMP1-207ENST00000539047 RABEP1Q15276 862 aa18.39■□□□□ 0.53
VAMP1-207ENST00000539047 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
VAMP1-207ENST00000539047 ARMT1Q9H993 441 aa18.39■□□□□ 0.53
VAMP1-207ENST00000539047 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
VAMP1-207ENST00000539047 TTF2Q9UNY4 1162 aaKnown RBP18.39■□□□□ 0.53
VAMP1-207ENST00000539047 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
VAMP1-207ENST00000539047 ECM29Q5VYK3 1845 aa18.39■□□□□ 0.53
VAMP1-207ENST00000539047 NFKBIEO00221 500 aa18.38■□□□□ 0.53
VAMP1-207ENST00000539047 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
VAMP1-207ENST00000539047 BECN1Q14457 450 aa18.38■□□□□ 0.53
VAMP1-207ENST00000539047 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
VAMP1-207ENST00000539047 NAPBQ9H115 298 aa18.38■□□□□ 0.53
VAMP1-207ENST00000539047 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
VAMP1-207ENST00000539047 FOCADQ5VW36 1801 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 PATL2C9JE40 543 aaKnown RBP18.37■□□□□ 0.53
VAMP1-207ENST00000539047 TDO2P48775 406 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 DACT2Q5SW24 774 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 LCORLQ8N3X6 602 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 TEKT1Q969V4 418 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
VAMP1-207ENST00000539047 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
VAMP1-207ENST00000539047 F8W031 263 aaPredicted RBP18.36■□□□□ 0.53
VAMP1-207ENST00000539047 ST18O60284 1047 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 PSMA5P28066 241 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 RASSF7Q02833 373 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 TNIP1Q15025 636 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
VAMP1-207ENST00000539047 ADGRA1Q86SQ6 560 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms