RNA–Protein interactions for RNA: ENST00000538974.5

RAPGEF4-214, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-214ENST00000538974 FILIP1LQ4L180 1135 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 TEX35Q5T0J7 233 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 IFIT1BQ5T764 474 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 NAA16Q6N069 864 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 CDC5LQ99459 802 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 A0A0U1RQG5 324 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 PRKAB2O43741 272 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 DNA2P51530 1060 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 SNW1Q13573 536 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 ARID5BQ14865 1188 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 TRMT1LQ7Z2T5 733 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 KLHL34Q8N239 644 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 NSUN7Q8NE18 718 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 WASF1Q92558 559 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 DNAI1Q9UI46 699 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 SH3TC1Q8TE82 1336 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 ZNF335Q9H4Z2 1342 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 ADGRB2O60241 1585 aa8.09□□□□□ -1.11
RAPGEF4-214ENST00000538974 C6orf229H3BNL8 230 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 DYNC1I1O14576 645 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZNF75DP51815 510 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 HS1BP3Q53T59 392 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 KRT40Q6A162 431 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 C11orf57Q6ZUT1 292 aaPredicted RBP8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 PIGBQ92521 554 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 SMARCE1Q969G3 411 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 DLC1Q96QB1 1528 aa8.09□□□□□ -1.12
RAPGEF4-214ENST00000538974 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 MPHOSPH10O00566 681 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 COBLO75128 1261 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 ERCC3P19447 782 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 NDUFA8P51970 172 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 GOLGA8FQ08AF8 430 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 GOLGA8DPQ0D2H9 430 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 ANO1Q5XXA6 986 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 DIS3L2Q8IYB7 885 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZMYND15Q9H091 742 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZNF202O95125 648 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 PDE6AP16499 860 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 CTSWP56202 376 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 MTX1Q13505 466 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 STOX1Q6ZVD7 989 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 UBXN4Q92575 508 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 CDK5RAP3Q96JB5 506 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 RNF41Q9H4P4 317 aaPredicted RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 PCDHA7Q9UN72 937 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 PNOCQ13519 176 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 KARSQ15046 597 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZNF174Q15697 407 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 MTERF4Q7Z6M4 381 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 CCDC47Q96A33 483 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 EEF2KMTQ96G04 330 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 MCM9Q9NXL9 1143 aa8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 AATFQ9NY61 560 aaKnown RBP eCLIP8.08□□□□□ -1.12
RAPGEF4-214ENST00000538974 RPAP1Q9BWH6 1393 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 CBFA2T2O43439 604 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 PDE8AO60658 829 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 PDIA6Q15084 440 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 PUM3Q15397 648 aaKnown RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZMYM1Q5SVZ6 1142 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 MYSM1Q5VVJ2 828 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 SPATA5Q8NB90 893 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 ESR2Q92731 530 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 PGBD1Q96JS3 809 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 DSCC1Q9BVC3 393 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 VPS54Q9P1Q0 977 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 CYP2D7A0A087X1C5 515 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 POLR3GO15318 223 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 POLR2DO15514 142 aaKnown RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 PFKFB2O60825 505 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 MCM7P33993 719 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 GNG11P61952 73 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 MAPK8IP2Q13387 824 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 ARHGAP29Q52LW3 1261 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 FAM47AQ5JRC9 791 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 BRINP3Q76B58 766 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 CAGE1Q8TC20 777 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 VWA3AA6NCI4 1184 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 BTBD18B2RXH4 712 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 U2AF2P26368 475 aaKnown RBP eCLIP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 SOGA3Q5TF21 947 aa8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZNF444Q8N0Y2 327 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 ARGLU1Q9NWB6 273 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 SAP30BPQ9UHR5 308 aaKnown RBP8.07□□□□□ -1.12
RAPGEF4-214ENST00000538974 HEG1Q9ULI3 1381 aa8.06□□□□□ -1.12
RAPGEF4-214ENST00000538974 CCDC194A0A1B0GVG4 234 aa8.06□□□□□ -1.12
RAPGEF4-214ENST00000538974 ERVV-2B6SEH9 535 aa8.06□□□□□ -1.12
RAPGEF4-214ENST00000538974 PICALMQ13492 652 aa8.06□□□□□ -1.12
RAPGEF4-214ENST00000538974 ZBTB38Q8NAP3 1195 aaPredicted RBP8.06□□□□□ -1.12
RAPGEF4-214ENST00000538974 RIMBP3CA6NJZ7 1639 aa8.06□□□□□ -1.12
RAPGEF4-214ENST00000538974 RIMBP3BA6NNM3 1639 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms