RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF70Q9UC06 446 aaPredicted RBP15.72■□□□□ 0.11
VAMP1-206ENST00000538970 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
VAMP1-206ENST00000538970 ALDH1A1P00352 501 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 CRKP46108 304 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 IREB2P48200 963 aaKnown RBP15.71■□□□□ 0.11
VAMP1-206ENST00000538970 GRIK5Q16478 980 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 ALDH1L2Q3SY69 923 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 CAVIN4Q5BKX8 364 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 VPS37DQ86XT2 251 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
VAMP1-206ENST00000538970 CDCA7LQ96GN5 454 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
VAMP1-206ENST00000538970 OTOFQ9HC10 1997 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 USP2O75604 605 aaPredicted RBP15.7■□□□□ 0.1
VAMP1-206ENST00000538970 INHBEP58166 350 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
VAMP1-206ENST00000538970 IFNL1Q8IU54 200 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 CDAN1Q8IWY9 1227 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 TBC1D22AQ8WUA7 517 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
VAMP1-206ENST00000538970 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
VAMP1-206ENST00000538970 KIF16BQ96L93 1317 aa15.69■□□□□ 0.1
VAMP1-206ENST00000538970 IGF2BP3O00425 579 aaKnown RBP eCLIP15.69■□□□□ 0.1
VAMP1-206ENST00000538970 FKTNO75072 461 aa15.69■□□□□ 0.1
VAMP1-206ENST00000538970 GJA5P36382 358 aa15.69■□□□□ 0.1
VAMP1-206ENST00000538970 RFX5P48382 616 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-206ENST00000538970 PUM3Q15397 648 aaKnown RBP15.69■□□□□ 0.1
VAMP1-206ENST00000538970 SMC4Q9NTJ3 1288 aa15.69■□□□□ 0.1
VAMP1-206ENST00000538970 BRCA2P51587 3418 aa15.69■□□□□ 0.1
VAMP1-206ENST00000538970 CENPFP49454 3210 aa15.68■□□□□ 0.1
VAMP1-206ENST00000538970 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
VAMP1-206ENST00000538970 FRAT2O75474 233 aaPredicted RBP15.68■□□□□ 0.1
VAMP1-206ENST00000538970 FGFR2P21802 821 aa15.68■□□□□ 0.1
VAMP1-206ENST00000538970 BCAMP50895 628 aa15.68■□□□□ 0.1
VAMP1-206ENST00000538970 HDLBPQ00341 1268 aaKnown RBP15.68■□□□□ 0.1
VAMP1-206ENST00000538970 TRMT2AQ8IZ69 625 aaKnown RBP15.68■□□□□ 0.1
VAMP1-206ENST00000538970 EYA2O00167 538 aa15.67■□□□□ 0.1
VAMP1-206ENST00000538970 TNNI2P48788 182 aa15.67■□□□□ 0.1
VAMP1-206ENST00000538970 TEKT1Q969V4 418 aa15.67■□□□□ 0.1
VAMP1-206ENST00000538970 TMEM39BQ9GZU3 492 aa15.67■□□□□ 0.1
VAMP1-206ENST00000538970 SZT2Q5T011 3432 aa15.66■□□□□ 0.1
VAMP1-206ENST00000538970 IFIT1P09914 478 aaKnown RBP15.66■□□□□ 0.1
VAMP1-206ENST00000538970 ZDHHC15Q96MV8 337 aa15.66■□□□□ 0.1
VAMP1-206ENST00000538970 ELP3Q9H9T3 547 aa15.66■□□□□ 0.1
VAMP1-206ENST00000538970 MAST3O60307 1309 aa15.66■□□□□ 0.1
VAMP1-206ENST00000538970 TESPA1A2RU30 521 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-206ENST00000538970 CT47B1P0C2W7 299 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-206ENST00000538970 CACNB3P54284 484 aa15.65■□□□□ 0.1
VAMP1-206ENST00000538970 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-206ENST00000538970 ATG9AQ7Z3C6 839 aa15.65■□□□□ 0.1
VAMP1-206ENST00000538970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.65■□□□□ 0.1
VAMP1-206ENST00000538970 OPTNQ96CV9 577 aa15.65■□□□□ 0.1
VAMP1-206ENST00000538970 MRIQ9BWK5 157 aa15.65■□□□□ 0.1
VAMP1-206ENST00000538970 COLQQ9Y215 455 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-206ENST00000538970 SUGT1Q9Y2Z0 365 aa15.65■□□□□ 0.1
VAMP1-206ENST00000538970 UBTFL1P0CB47 393 aaPredicted RBP15.64■□□□□ 0.09
VAMP1-206ENST00000538970 SLC5A1P13866 664 aa15.64■□□□□ 0.09
VAMP1-206ENST00000538970 VGLL4Q14135 290 aa15.64■□□□□ 0.09
VAMP1-206ENST00000538970 APOBEC3HQ6NTF7 200 aaKnown RBP15.64■□□□□ 0.09
VAMP1-206ENST00000538970 LPIN2Q92539 896 aa15.64■□□□□ 0.09
VAMP1-206ENST00000538970 PTPN18Q99952 460 aa15.64■□□□□ 0.09
VAMP1-206ENST00000538970 CIAO1O76071 339 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 CRHR2Q13324 411 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 OTUD7BQ6GQQ9 843 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 FAM83AQ86UY5 434 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
VAMP1-206ENST00000538970 TMOD2Q9NZR1 351 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 FBXO3Q9UK99 471 aa15.63■□□□□ 0.09
VAMP1-206ENST00000538970 NOB1Q9ULX3 412 aaKnown RBP15.63■□□□□ 0.09
VAMP1-206ENST00000538970 RPAP1Q9BWH6 1393 aaPredicted RBP15.62■□□□□ 0.09
VAMP1-206ENST00000538970 EN2P19622 333 aaPredicted RBP15.62■□□□□ 0.09
VAMP1-206ENST00000538970 MAP3K9P80192 1104 aa15.62■□□□□ 0.09
VAMP1-206ENST00000538970 FKBP1CQ5VVH2 108 aa15.62■□□□□ 0.09
VAMP1-206ENST00000538970 HHIPL2Q6UWX4 724 aa15.62■□□□□ 0.09
VAMP1-206ENST00000538970 OTOP1Q7RTM1 612 aa15.62■□□□□ 0.09
VAMP1-206ENST00000538970 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
VAMP1-206ENST00000538970 SIL1Q9H173 461 aa15.62■□□□□ 0.09
VAMP1-206ENST00000538970 RBBP6Q7Z6E9 1792 aaKnown RBP15.62■□□□□ 0.09
VAMP1-206ENST00000538970 ATP2B3Q16720 1220 aa15.61■□□□□ 0.09
VAMP1-206ENST00000538970 BRI3BPQ8WY22 251 aa15.61■□□□□ 0.09
VAMP1-206ENST00000538970 ERO1AQ96HE7 468 aa15.61■□□□□ 0.09
VAMP1-206ENST00000538970 TRIM17Q9Y577 477 aa15.61■□□□□ 0.09
VAMP1-206ENST00000538970 CSADQ9Y600 493 aa15.61■□□□□ 0.09
VAMP1-206ENST00000538970 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
VAMP1-206ENST00000538970 MYH13Q9UKX3 1938 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 SPDYE5A6NIY4 337 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 GTF2A2P52657 109 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 CD99L2Q8TCZ2 262 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 SNCAIPQ9Y6H5 919 aa15.6■□□□□ 0.09
VAMP1-206ENST00000538970 CCL15-CCL14A0A0B4J2E2 113 aa15.59■□□□□ 0.09
VAMP1-206ENST00000538970 IL15P40933 162 aaPredicted RBP15.59■□□□□ 0.09
VAMP1-206ENST00000538970 CCL15Q16663 113 aa15.59■□□□□ 0.09
VAMP1-206ENST00000538970 HOOK2Q96ED9 719 aa15.59■□□□□ 0.09
VAMP1-206ENST00000538970 WRNIP1Q96S55 665 aa15.59■□□□□ 0.09
VAMP1-206ENST00000538970 MEIS3Q99687 375 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms