RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CRKP46108 304 aa16.92■□□□□ 0.3
CD9-208ENST00000538834 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
CD9-208ENST00000538834 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
CD9-208ENST00000538834 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
CD9-208ENST00000538834 ZDHHC15Q96MV8 337 aa16.92■□□□□ 0.3
CD9-208ENST00000538834 MAST2Q6P0Q8 1798 aa16.92■□□□□ 0.3
CD9-208ENST00000538834 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
CD9-208ENST00000538834 CELF2O95319 508 aaKnown RBP16.91■□□□□ 0.3
CD9-208ENST00000538834 SPDYE2Q495Y8 402 aa16.91■□□□□ 0.3
CD9-208ENST00000538834 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
CD9-208ENST00000538834 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
CD9-208ENST00000538834 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
CD9-208ENST00000538834 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
CD9-208ENST00000538834 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
CD9-208ENST00000538834 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
CD9-208ENST00000538834 MYH7P12883 1935 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 PRDX5P30044 214 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 MCAMP43121 646 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 HSP90AB4PQ58FF6 505 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
CD9-208ENST00000538834 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 DBNDD2Q9BQY9 259 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 MAST3O60307 1309 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
CD9-208ENST00000538834 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.3
CD9-208ENST00000538834 HMMRO75330 724 aa16.89■□□□□ 0.29
CD9-208ENST00000538834 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
CD9-208ENST00000538834 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
CD9-208ENST00000538834 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
CD9-208ENST00000538834 ZNF70Q9UC06 446 aaPredicted RBP16.89■□□□□ 0.29
CD9-208ENST00000538834 PPP2R3BQ9Y5P8 575 aa16.89■□□□□ 0.29
CD9-208ENST00000538834 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 UQCRFS1P1P0C7P4 283 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 VEGFBP49765 207 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 FKBP1BP68106 108 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
CD9-208ENST00000538834 SCAF8Q9UPN6 1271 aaKnown RBP16.88■□□□□ 0.29
CD9-208ENST00000538834 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 GAKO14976 1311 aa16.88■□□□□ 0.29
CD9-208ENST00000538834 IGSF3O75054 1194 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
CD9-208ENST00000538834 SPATA5Q8NB90 893 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 KIF1BPQ96EK5 621 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 DCTPP1Q9H773 170 aa16.87■□□□□ 0.29
CD9-208ENST00000538834 TDRD3Q9H7E2 651 aaKnown RBP16.87■□□□□ 0.29
CD9-208ENST00000538834 GBA2Q9HCG7 927 aaPredicted RBP16.87■□□□□ 0.29
CD9-208ENST00000538834 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
CD9-208ENST00000538834 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
CD9-208ENST00000538834 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
CD9-208ENST00000538834 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
CD9-208ENST00000538834 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
CD9-208ENST00000538834 RFX7Q2KHR2 1363 aa16.86■□□□□ 0.29
CD9-208ENST00000538834 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
CD9-208ENST00000538834 MYO1BO43795 1136 aa16.85■□□□□ 0.29
CD9-208ENST00000538834 PRAMEF18Q5VWM3 479 aa16.85■□□□□ 0.29
CD9-208ENST00000538834 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
CD9-208ENST00000538834 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
CD9-208ENST00000538834 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 CYP2E1P05181 493 aaPredicted RBP16.84■□□□□ 0.29
CD9-208ENST00000538834 AAMPQ13685 434 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 DIXDC1Q155Q3 683 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 C2orf69Q8N8R5 385 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 NSUN4Q96CB9 384 aaKnown RBP16.84■□□□□ 0.29
CD9-208ENST00000538834 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
CD9-208ENST00000538834 RBM5P52756 815 aaKnown RBP eCLIP16.83■□□□□ 0.28
CD9-208ENST00000538834 RASA3Q14644 834 aa16.83■□□□□ 0.28
CD9-208ENST00000538834 SPTY2D1Q68D10 685 aaPredicted RBP16.83■□□□□ 0.28
CD9-208ENST00000538834 CDC42EP5Q6NZY7 148 aa16.83■□□□□ 0.28
CD9-208ENST00000538834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.83■□□□□ 0.28
CD9-208ENST00000538834 CAPNS2Q96L46 248 aa16.83■□□□□ 0.28
CD9-208ENST00000538834 RPAP1Q9BWH6 1393 aaPredicted RBP16.83■□□□□ 0.28
CD9-208ENST00000538834 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
CD9-208ENST00000538834 ABT1Q9ULW3 272 aaKnown RBP16.83■□□□□ 0.28
CD9-208ENST00000538834 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 GPR75-ASB3A0A0A6YYF3 556 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 HUNKP57058 714 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 MECOMQ03112 1051 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 CYP4F22Q6NT55 531 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 ZNF408Q9H9D4 720 aa16.82■□□□□ 0.28
CD9-208ENST00000538834 MYH1P12882 1939 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 MAP2K2P36507 400 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 ECE1P42892 770 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 ZAP70P43403 619 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 RHBDL3P58872 404 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 TNFAIP1Q13829 316 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 NBPF12Q5TAG4 269 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms