RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 ST5P78524 1137 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 DDR1Q08345 913 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 G3BP1Q13283 466 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC02408-202ENST00000538573 IFIT5Q13325 482 aaKnown RBP6.41□□□□□ -1.38
LINC02408-202ENST00000538573 CCDC57Q2TAC2 916 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 HSP90AB4PQ58FF6 505 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 TAF7LQ5H9L4 462 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 SMC5Q8IY18 1101 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 CNBD1Q8NA66 436 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 TTLL11Q8NHH1 800 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 KLHDC4Q8TBB5 520 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 ZNF594Q96JF6 807 aaPredicted RBP6.41□□□□□ -1.38
LINC02408-202ENST00000538573 NLRP3Q96P20 1036 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 PDGFDQ9GZP0 370 aaPredicted RBP6.41□□□□□ -1.38
LINC02408-202ENST00000538573 SIL1Q9H173 461 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 PARP3Q9Y6F1 533 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 COL24A1Q17RW2 1714 aa6.41□□□□□ -1.38
LINC02408-202ENST00000538573 DDX60Q8IY21 1712 aaKnown RBP6.41□□□□□ -1.38
LINC02408-202ENST00000538573 ANKRD18BA2A2Z9 1011 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 POLRMTO00411 1230 aaKnown RBP6.4□□□□□ -1.38
LINC02408-202ENST00000538573 SMARCA5O60264 1052 aaPredicted RBP6.4□□□□□ -1.38
LINC02408-202ENST00000538573 RAB11FIP3O75154 756 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 KDM4AO75164 1064 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 ITGA6P23229 1130 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 RFX5P48382 616 aaPredicted RBP6.4□□□□□ -1.38
LINC02408-202ENST00000538573 RGS3P49796 1198 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 NUCB1Q02818 461 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 PTPN12Q05209 780 aaKnown RBP6.4□□□□□ -1.38
LINC02408-202ENST00000538573 MAP2K5Q13163 448 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 R3HDM1Q15032 1099 aaKnown RBP6.4□□□□□ -1.38
LINC02408-202ENST00000538573 CCDC152Q4G0S7 254 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 MSS51Q4VC12 460 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 PRR5LQ6MZQ0 368 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 RNF19BQ6ZMZ0 732 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 CHD1LQ86WJ1 897 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 SKAP1Q86WV1 359 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 LRRCC1Q9C099 1032 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 LNPKQ9C0E8 428 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 GREM2Q9H772 168 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 PRDM9Q9NQV7 894 aa6.4□□□□□ -1.38
LINC02408-202ENST00000538573 NOP58Q9Y2X3 529 aaKnown RBP6.4□□□□□ -1.38
LINC02408-202ENST00000538573 LAMB2P55268 1798 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 CASZ1Q86V15 1759 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 SF3B3Q15393 1217 aaKnown RBP6.39□□□□□ -1.39
LINC02408-202ENST00000538573 LDHAL6AQ6ZMR3 332 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 ERC1Q8IUD2 1116 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 RHPN1Q8TCX5 695 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 SLC16A10Q8TF71 515 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 KIF1BPQ96EK5 621 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 IL1RAPL2Q9NP60 686 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 COPRSQ9NQ92 184 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 SEC31BQ9NQW1 1179 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 ABCC12Q96J65 1359 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 TAF1P21675 1872 aa6.39□□□□□ -1.39
LINC02408-202ENST00000538573 EYA2O00167 538 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 SASH1O94885 1247 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 ZBTB7AO95365 584 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 CD46P15529 392 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 IGHMBP2P38935 993 aaKnown RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 MDM2Q00987 491 aaPredicted RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 CTC1Q2NKJ3 1217 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 LRRC24Q50LG9 513 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 DDX46Q7L014 1031 aaKnown RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 C16orf71Q8IYS4 520 aaPredicted RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 RPGRQ92834 1020 aaKnown RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 CDC5LQ99459 802 aaKnown RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 MPHOSPH8Q99549 860 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 USB1Q9BQ65 265 aaKnown RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 PUS3Q9BZE2 481 aaKnown RBP6.38□□□□□ -1.39
LINC02408-202ENST00000538573 CNNM1Q9NRU3 951 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 TOR4AQ9NXH8 423 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 SPEF2Q9C093 1822 aa6.38□□□□□ -1.39
LINC02408-202ENST00000538573 IRF6O14896 467 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 CIAO1O76071 339 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 IL15P40933 162 aaPredicted RBP6.37□□□□□ -1.39
LINC02408-202ENST00000538573 USP46P62068 366 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 TFCP2Q12800 502 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 ATG9AQ7Z3C6 839 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 CLASRPQ8N2M8 674 aaKnown RBP6.37□□□□□ -1.39
LINC02408-202ENST00000538573 RBM17Q96I25 401 aaKnown RBP6.37□□□□□ -1.39
LINC02408-202ENST00000538573 BRIP1Q9BX63 1249 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
LINC02408-202ENST00000538573 NRXN2Q9P2S2 1712 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 TNRC6CQ9HCJ0 1690 aaKnown RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 RTL9Q8NET4 1388 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 IFIT2P09913 472 aaKnown RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 POLD1P28340 1107 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 PDE6BP35913 854 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 RPS8P62241 208 aaKnown RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 PDE4CQ08493 712 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 TRIM32Q13049 653 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 METTL24Q5JXM2 366 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 AACSQ86V21 672 aa6.36□□□□□ -1.39
LINC02408-202ENST00000538573 HELBQ8NG08 1087 aaPredicted RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 SNIP1Q8TAD8 396 aaKnown RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 OTUD7AQ8TE49 926 aaPredicted RBP6.36□□□□□ -1.39
LINC02408-202ENST00000538573 CELF1Q92879 486 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms