RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 VIL1P09327 827 aaKnown RBP13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 TTLL5Q6EMB2 1281 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 TMED8Q6PL24 325 aaPredicted RBP13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 AACSQ86V21 672 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 ZGPATQ8N5A5 531 aaKnown RBP13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 WDR66Q8TBY9 1149 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 DPF2Q92785 391 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 DBNDD1Q9H9R9 158 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 FAM205AQ6ZU69 1335 aa13.52□□□□□ -0.25
AC087235.1-201ENST00000538297 SNAP23O00161 211 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 IGHDP01880 384 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 GYG1P46976 350 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 BCAMP50895 628 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 CXCL9Q07325 125 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
AC087235.1-201ENST00000538297 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
AC087235.1-201ENST00000538297 NUCB1Q02818 461 aa13.5□□□□□ -0.25
AC087235.1-201ENST00000538297 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
AC087235.1-201ENST00000538297 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
AC087235.1-201ENST00000538297 MRIQ9BWK5 157 aa13.5□□□□□ -0.25
AC087235.1-201ENST00000538297 ARAP2Q8WZ64 1704 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 IQCA1LA6NCM1 817 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 YDJCA8MPS7 323 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 APBB1O00213 710 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 KLRK1P26718 216 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 TTC39AQ5SRH9 613 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 GPR153Q6NV75 609 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 CHD1LQ86WJ1 897 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 TICAM2Q86XR7 235 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 UTRNP46939 3433 aa13.49□□□□□ -0.25
AC087235.1-201ENST00000538297 ERC2O15083 957 aa13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 ATP5JP18859 108 aa13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 PHKA1P46020 1223 aa13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 DACT2Q5SW24 774 aa13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 OGFOD1Q8N543 542 aa13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 DBNDD2Q9BQY9 259 aa13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
AC087235.1-201ENST00000538297 MAST3O60307 1309 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 PSMD14O00487 310 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 RAD17O75943 681 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 ADORA1P30542 326 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 GTF2IP78347 998 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 HDLBPQ00341 1268 aaKnown RBP13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 TTF1Q15361 905 aaPredicted RBP13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 SPATA5Q8NB90 893 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 PSME4Q14997 1843 aa13.47□□□□□ -0.25
AC087235.1-201ENST00000538297 TIAM2Q8IVF5 1701 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 COL4A5P29400 1685 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 H7C1D1 291 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 VEGFAP15692 232 aaPredicted RBP13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 MFSD14BQ5SR56 506 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 SLF2Q8IX21 1173 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 GMLQ99445 158 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.25
AC087235.1-201ENST00000538297 AOX1Q06278 1338 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 MX1P20591 662 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 YY1P25490 414 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 PNMA8AQ86V59 439 aaPredicted RBP13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 OSBPL3Q9H4L5 887 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
AC087235.1-201ENST00000538297 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 DDNO94850 711 aaPredicted RBP13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 LRRFIP1Q32MZ4 808 aaKnown RBP13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 KCNQ5Q9NR82 932 aa13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 GPRC5DQ9NZD1 345 aa13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 HMG20BQ9P0W2 317 aa13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 SCN4AP35499 1836 aa13.44□□□□□ -0.26
AC087235.1-201ENST00000538297 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 LDHBP07195 334 aaKnown RBP13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 MCAMP43121 646 aa13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 ZNF280AP59817 542 aaPredicted RBP13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 MTMR14Q8NCE2 650 aa13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 HAUS7Q99871 368 aa13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 TLR7Q9NYK1 1049 aaKnown RBP13.43□□□□□ -0.26
AC087235.1-201ENST00000538297 CNOT7Q9UIV1 285 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms