RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 PPP1R37O75864 691 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 MDM2Q00987 491 aaPredicted RBP12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 CCL15Q16663 113 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 TTLL7Q6ZT98 887 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 TBC1D16Q8TBP0 767 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 ASB2Q96Q27 587 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 SASH1O94885 1247 aa12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 PARP10Q53GL7 1025 aa12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 UTP14AQ9BVJ6 771 aaKnown RBP12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 COL1A1P02452 1464 aaPredicted RBP12.83□□□□□ -0.36
PRKAB1-204ENST00000538271 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
PRKAB1-204ENST00000538271 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
PRKAB1-204ENST00000538271 HELBQ8NG08 1087 aaPredicted RBP12.82□□□□□ -0.36
PRKAB1-204ENST00000538271 DEFB129Q9H1M3 183 aa12.82□□□□□ -0.36
PRKAB1-204ENST00000538271 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
PRKAB1-204ENST00000538271 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
PRKAB1-204ENST00000538271 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
PRKAB1-204ENST00000538271 IREB2P48200 963 aaKnown RBP12.81□□□□□ -0.36
PRKAB1-204ENST00000538271 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
PRKAB1-204ENST00000538271 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
PRKAB1-204ENST00000538271 OTOFQ9HC10 1997 aa12.81□□□□□ -0.36
PRKAB1-204ENST00000538271 TCF20Q9UGU0 1960 aaKnown RBP12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 USP2O75604 605 aaPredicted RBP12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 GTF2A2P52657 109 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 PRKCZQ05513 592 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 TMEM31Q5JXX7 168 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 ADGRA2Q96PE1 1338 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 CEMIPQ8WUJ3 1361 aa12.8□□□□□ -0.36
PRKAB1-204ENST00000538271 CACNA1GO43497 2377 aa12.79□□□□□ -0.36
PRKAB1-204ENST00000538271 INHAP05111 366 aa12.79□□□□□ -0.36
PRKAB1-204ENST00000538271 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
PRKAB1-204ENST00000538271 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
PRKAB1-204ENST00000538271 EPHX3Q9H6B9 360 aa12.79□□□□□ -0.36
PRKAB1-204ENST00000538271 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
PRKAB1-204ENST00000538271 EMP3P54852 163 aa12.78□□□□□ -0.36
PRKAB1-204ENST00000538271 MRPS5P82675 430 aaKnown RBP12.78□□□□□ -0.36
PRKAB1-204ENST00000538271 NECAB3Q96P71 396 aaPredicted RBP12.78□□□□□ -0.36
PRKAB1-204ENST00000538271 ZCCHC17Q9NP64 241 aaKnown RBP12.78□□□□□ -0.36
PRKAB1-204ENST00000538271 THEGQ9P2T0 379 aa12.78□□□□□ -0.36
PRKAB1-204ENST00000538271 COL4A1P02462 1669 aa12.77□□□□□ -0.36
PRKAB1-204ENST00000538271 MGAMO43451 1857 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 ADCY3O60266 1144 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 SUPT20HL1Q3ZLR7 823 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 MXD3Q9BW11 206 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 C11orf49Q9H6J7 331 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
PRKAB1-204ENST00000538271 BTBD19C9JJ37 291 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 UFL1O94874 794 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 ELNP15502 786 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 NBPF12Q5TAG4 269 aaPredicted RBP12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 GABRQQ9UN88 632 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 PPP2R3BQ9Y5P8 575 aa12.76□□□□□ -0.37
PRKAB1-204ENST00000538271 PODNQ7Z5L7 613 aa12.75□□□□□ -0.37
PRKAB1-204ENST00000538271 ZDBF2Q9HCK1 2354 aa12.75□□□□□ -0.37
PRKAB1-204ENST00000538271 RRP7AQ9Y3A4 280 aaKnown RBP12.75□□□□□ -0.37
PRKAB1-204ENST00000538271 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
PRKAB1-204ENST00000538271 FOXK2Q01167 660 aa12.74□□□□□ -0.37
PRKAB1-204ENST00000538271 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
PRKAB1-204ENST00000538271 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
PRKAB1-204ENST00000538271 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
PRKAB1-204ENST00000538271 GPR37L1O60883 481 aa12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 CETPP11597 493 aa12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 MMP14P50281 582 aa12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 GGA1Q9UJY5 639 aa12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 MYO9BQ13459 2157 aa12.73□□□□□ -0.37
PRKAB1-204ENST00000538271 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 PFASO15067 1338 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 MYO3BQ8WXR4 1341 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 MYL6BP14649 208 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 FCGRTP55899 365 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 NBR1Q14596 966 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 GRIN2CQ14957 1233 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 SHHQ15465 462 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
PRKAB1-204ENST00000538271 ZNF804BA4D1E1 1349 aa12.71□□□□□ -0.37
PRKAB1-204ENST00000538271 SH3TC1Q8TE82 1336 aa12.71□□□□□ -0.37
PRKAB1-204ENST00000538271 FLT3LGP49771 235 aa12.71□□□□□ -0.37
PRKAB1-204ENST00000538271 NHLH1Q02575 133 aa12.71□□□□□ -0.37
PRKAB1-204ENST00000538271 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
PRKAB1-204ENST00000538271 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms