RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 WNT10BO00744 389 aa16.06■□□□□ 0.16
CHFR-216ENST00000538235 RFX7Q2KHR2 1363 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
CHFR-216ENST00000538235 TOMM70O94826 608 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
CHFR-216ENST00000538235 PDE4AP27815 886 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 CFAP100Q494V2 611 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 GORABQ5T7V8 394 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
CHFR-216ENST00000538235 ADGRA1Q86SQ6 560 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 LDHDQ86WU2 507 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 RBM46Q8TBY0 533 aaKnown RBP16.05■□□□□ 0.16
CHFR-216ENST00000538235 PRMT6Q96LA8 375 aaPredicted RBP16.05■□□□□ 0.16
CHFR-216ENST00000538235 GGA3Q9NZ52 723 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 PGAP2Q9UHJ9 254 aa16.05■□□□□ 0.16
CHFR-216ENST00000538235 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 H7C1D1 291 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 TRAF5O00463 557 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
CHFR-216ENST00000538235 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
CHFR-216ENST00000538235 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 CRKP46108 304 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 ANKRD45Q5TZF3 282 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 WDR66Q8TBY9 1149 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 GLIS2Q9BZE0 524 aaPredicted RBP16.04■□□□□ 0.16
CHFR-216ENST00000538235 LNPKQ9C0E8 428 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
CHFR-216ENST00000538235 DAGLAQ9Y4D2 1042 aa16.04■□□□□ 0.16
CHFR-216ENST00000538235 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 PASKQ96RG2 1323 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 NUCB1Q02818 461 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 CCDC158Q5M9N0 1113 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 ANGEL2Q5VTE6 544 aaKnown RBP16.03■□□□□ 0.16
CHFR-216ENST00000538235 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 CDAN1Q8IWY9 1227 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 MTMR14Q8NCE2 650 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 GCC1Q96CN9 775 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 ABCF2Q9UG63 623 aa16.03■□□□□ 0.16
CHFR-216ENST00000538235 GAKO14976 1311 aa16.02■□□□□ 0.16
CHFR-216ENST00000538235 CLRN2A0PK11 232 aa16.02■□□□□ 0.16
CHFR-216ENST00000538235 MECOMQ03112 1051 aa16.02■□□□□ 0.16
CHFR-216ENST00000538235 APOBEC3HQ6NTF7 200 aaKnown RBP16.02■□□□□ 0.16
CHFR-216ENST00000538235 PNMA8AQ86V59 439 aaPredicted RBP16.02■□□□□ 0.16
CHFR-216ENST00000538235 NSUN4Q96CB9 384 aaKnown RBP16.02■□□□□ 0.16
CHFR-216ENST00000538235 RWDD1Q9H446 243 aaPredicted RBP16.02■□□□□ 0.16
CHFR-216ENST00000538235 ATP5JP18859 108 aa16.01■□□□□ 0.15
CHFR-216ENST00000538235 CACNB3P54284 484 aa16.01■□□□□ 0.15
CHFR-216ENST00000538235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHFR-216ENST00000538235 MYH1P12882 1939 aa16.01■□□□□ 0.15
CHFR-216ENST00000538235 BAZ2AQ9UIF9 1905 aaKnown RBP16.01■□□□□ 0.15
CHFR-216ENST00000538235 CNTNAP1P78357 1384 aa16■□□□□ 0.15
CHFR-216ENST00000538235 LDHBP07195 334 aaKnown RBP16■□□□□ 0.15
CHFR-216ENST00000538235 C1QTNF8P60827 252 aa16■□□□□ 0.15
CHFR-216ENST00000538235 HTRA3P83110 453 aa16■□□□□ 0.15
CHFR-216ENST00000538235 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
CHFR-216ENST00000538235 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
CHFR-216ENST00000538235 HAUS7Q99871 368 aa16■□□□□ 0.15
CHFR-216ENST00000538235 TDRD3Q9H7E2 651 aaKnown RBP16■□□□□ 0.15
CHFR-216ENST00000538235 SERPINA10Q9UK55 444 aa16■□□□□ 0.15
CHFR-216ENST00000538235 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
CHFR-216ENST00000538235 GOLIM4O00461 696 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 MAP4K4O95819 1239 aaPredicted RBP15.99■□□□□ 0.15
CHFR-216ENST00000538235 MX1P20591 662 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 PRAMEF18Q5VWM3 479 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 ZDHHC15Q96MV8 337 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 ECHDC1Q9NTX5 307 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 SUGT1Q9Y2Z0 365 aa15.99■□□□□ 0.15
CHFR-216ENST00000538235 MROH7-TTC4A0A0A0MT08 1334 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 PDE1AP54750 535 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 HDLBPQ00341 1268 aaKnown RBP15.98■□□□□ 0.15
CHFR-216ENST00000538235 DLGAP5Q15398 846 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 HHIPL2Q6UWX4 724 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 USP48Q86UV5 1035 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 OGFOD1Q8N543 542 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 TEKT1Q969V4 418 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 ZNF70Q9UC06 446 aaPredicted RBP15.98■□□□□ 0.15
CHFR-216ENST00000538235 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
CHFR-216ENST00000538235 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 RHBDL3P58872 404 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 NFIAQ12857 509 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 CDC42EP5Q6NZY7 148 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 ZC3H15Q8WU90 426 aaKnown RBP15.97■□□□□ 0.15
CHFR-216ENST00000538235 RAI14Q9P0K7 980 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 FZD1Q9UP38 647 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 LAMB1P07942 1786 aa15.97■□□□□ 0.15
CHFR-216ENST00000538235 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.15
CHFR-216ENST00000538235 PITPNM2Q9BZ72 1349 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms