RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 CCL15Q16663 113 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.33
VPS37C-204ENST00000538036 HOOK2Q96ED9 719 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
VPS37C-204ENST00000538036 JAG2Q9Y219 1238 aa12.96□□□□□ -0.33
VPS37C-204ENST00000538036 RBBP6Q7Z6E9 1792 aaKnown RBP12.95□□□□□ -0.34
VPS37C-204ENST00000538036 GRM8O00222 908 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 CETPP11597 493 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 FXR1P51114 621 aaKnown RBP eCLIP12.95□□□□□ -0.34
VPS37C-204ENST00000538036 PRMT2P55345 433 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 VGLL4Q14135 290 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 WDR63Q8IWG1 891 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
VPS37C-204ENST00000538036 MRIQ9BWK5 157 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
VPS37C-204ENST00000538036 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
VPS37C-204ENST00000538036 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 SPDYE5A6NIY4 337 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 TCP10L2B9ZVM9 353 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 TLR2O60603 784 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 CRKP46108 304 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 CAP1Q01518 475 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 EPHA10Q5JZY3 1008 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 TBC1D22AQ8WUA7 517 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
VPS37C-204ENST00000538036 TMEM39BQ9GZU3 492 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
VPS37C-204ENST00000538036 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
VPS37C-204ENST00000538036 MROH5Q6ZUA9 1318 aa12.93□□□□□ -0.34
VPS37C-204ENST00000538036 F6X3S4 739 aa12.93□□□□□ -0.34
VPS37C-204ENST00000538036 GYG1P46976 350 aa12.93□□□□□ -0.34
VPS37C-204ENST00000538036 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
VPS37C-204ENST00000538036 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
VPS37C-204ENST00000538036 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
VPS37C-204ENST00000538036 LACTBP83111 547 aaPredicted RBP12.92□□□□□ -0.34
VPS37C-204ENST00000538036 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 FAM83AQ86UY5 434 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 VPS37DQ86XT2 251 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 TEKT1Q969V4 418 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
VPS37C-204ENST00000538036 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
VPS37C-204ENST00000538036 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
VPS37C-204ENST00000538036 PPIL2Q13356 520 aa12.91□□□□□ -0.34
VPS37C-204ENST00000538036 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
VPS37C-204ENST00000538036 ZDHHC15Q96MV8 337 aa12.91□□□□□ -0.34
VPS37C-204ENST00000538036 RIPOR2Q9Y4F9 1068 aa12.91□□□□□ -0.34
VPS37C-204ENST00000538036 CENPFP49454 3210 aa12.91□□□□□ -0.34
VPS37C-204ENST00000538036 BTBD19C9JJ37 291 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 IRF6O14896 467 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
VPS37C-204ENST00000538036 HOXD10P28358 340 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 PPATQ06203 517 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 DCAF15Q66K64 600 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 WRNIP1Q96S55 665 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 SRCIN1Q9C0H9 1055 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 SNCAIPQ9Y6H5 919 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 CEP290O15078 2479 aa12.9□□□□□ -0.34
VPS37C-204ENST00000538036 MAST3O60307 1309 aa12.89□□□□□ -0.35
VPS37C-204ENST00000538036 H0YGN5 161 aa12.89□□□□□ -0.35
VPS37C-204ENST00000538036 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
VPS37C-204ENST00000538036 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
VPS37C-204ENST00000538036 PDE8BO95263 885 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 APOBEC3HQ6NTF7 200 aaKnown RBP12.88□□□□□ -0.35
VPS37C-204ENST00000538036 C17orf99Q6UX52 265 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 SH3TC2Q8TF17 1288 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
VPS37C-204ENST00000538036 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 UTYO14607 1347 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
VPS37C-204ENST00000538036 A0A1B0GUL6 1792 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
VPS37C-204ENST00000538036 CHAF1AQ13111 956 aaPredicted RBP12.87□□□□□ -0.35
VPS37C-204ENST00000538036 GRIK5Q16478 980 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 RABL6Q3YEC7 729 aaPredicted RBP12.87□□□□□ -0.35
VPS37C-204ENST00000538036 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 METTL24Q5JXM2 366 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 SUCLG2Q96I99 432 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 SRRDQ9UH36 339 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
VPS37C-204ENST00000538036 TRIOBPQ9H2D6 2365 aa12.86□□□□□ -0.35
VPS37C-204ENST00000538036 MYCP01106 439 aaPredicted RBP12.86□□□□□ -0.35
VPS37C-204ENST00000538036 CAPN2P17655 700 aa12.86□□□□□ -0.35
VPS37C-204ENST00000538036 PSMC4P43686 418 aa12.86□□□□□ -0.35
VPS37C-204ENST00000538036 CACNB3P54284 484 aa12.86□□□□□ -0.35
VPS37C-204ENST00000538036 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
VPS37C-204ENST00000538036 IQSEC3Q9UPP2 1182 aaPredicted RBP12.86□□□□□ -0.35
VPS37C-204ENST00000538036 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms