RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GJC1P36383 396 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 SH3BGRP55822 239 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 FERMT2Q96AC1 680 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 I3L4J1 428 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 IDH1O75874 414 aaKnown RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 TCP11Q8WWU5 503 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 PLCB1Q9NQ66 1216 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 SEC31AO94979 1220 aaKnown RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 ATP2A2P16615 1042 aaKnown RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 ASIC1P78348 528 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 KRI1Q8N9T8 703 aaKnown RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 ZC4H2Q9NQZ6 224 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 SPTLC2O15270 562 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 MTX1Q13505 466 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 TMEM67Q5HYA8 995 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 SLC26A6Q9BXS9 759 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 PYCARDQ9ULZ3 195 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 NPHP3Q7Z494 1330 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 IFIT3O14879 490 aaKnown RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 ATP2A1O14983 1001 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 POLE2P56282 527 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 HHATQ5VTY9 493 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 TMEM132EQ6IEE7 984 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CCDC26Q8TAB7 109 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CXorf38Q8TB03 319 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 TRIM31Q9BZY9 425 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 VCX3AQ9NNX9 186 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CCDC194A0A1B0GVG4 234 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CATIPQ7Z7H3 387 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CALML4Q96GE6 196 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 HMG20BQ9P0W2 317 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 EVA1CP58658 441 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 SF3B2Q13435 895 aaKnown RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 MINDY4BA8MYZ0 360 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 ZBTB22O15209 634 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 TTF1Q15361 905 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 TEX11Q8IYF3 940 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 DESI2Q9BSY9 194 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CEP126Q9P2H0 1117 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 TRIM35Q9UPQ4 493 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CC2D2AQ9P2K1 1620 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 YY1AP1Q9H869 796 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 MMRN2Q9H8L6 949 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CALR3Q96L12 384 aaKnown RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 CLSTN2Q9H4D0 955 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 RAD54L2Q9Y4B4 1467 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 PNMA6AP0CW24 399 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-215ENST00000537824 LRMPQ12912 555 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 HECW1Q76N89 1606 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 THEGQ9P2T0 379 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 PPP1R9AQ9ULJ8 1098 aa6.35□□□□□ -1.39
CSMD1-215ENST00000537824 RNF8O76064 485 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ALDH1L2Q3SY69 923 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 USP6NLQ92738 828 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 AIDAQ96BJ3 306 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 NAPBQ9H115 298 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 HNRNPH2P55795 449 aaKnown RBP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 CHD4Q14839 1912 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ACTN2P35609 894 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ESYT1Q9BSJ8 1104 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 TCP11L1Q9NUJ3 509 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 UTP11Q9Y3A2 253 aaKnown RBP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ERCC5P28715 1186 aaPredicted RBP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ARMC9Q7Z3E5 817 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 NUTM2AQ8IVF1 878 aaPredicted RBP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 PDCD7Q8N8D1 485 aaKnown RBP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 RAB34Q9BZG1 259 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 FAN1Q9Y2M0 1017 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 SCN2AQ99250 2005 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 METAP2P50579 478 aaKnown RBP eCLIP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 NLRP5P59047 1200 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 MYL5Q02045 173 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 SYCP3Q8IZU3 236 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 NOX5Q96PH1 765 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 PEG3Q9GZU2 1588 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ATAD2Q6PL18 1390 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 CACNA1IQ9P0X4 2223 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 CAMSAP2Q08AD1 1489 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 PSME1Q06323 249 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 TRPC3Q13507 836 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 TADA2BQ86TJ2 420 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 ANKRD24Q8TF21 1146 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 FAM204AQ9H8W3 233 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 BICDL2A1A5D9 508 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 EXOC4Q96A65 974 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 SPTBN2O15020 2390 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 TAF11Q15544 211 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 MRRFQ96E11 262 aaKnown RBP6.34□□□□□ -1.39
CSMD1-215ENST00000537824 CENPKQ9BS16 269 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 SYNRGQ9UMZ2 1314 aa6.34□□□□□ -1.39
CSMD1-215ENST00000537824 GOLGA8KD6RF30 607 aa6.34□□□□□ -1.4
CSMD1-215ENST00000537824 RGS16O15492 202 aaPredicted RBP6.34□□□□□ -1.4
CSMD1-215ENST00000537824 NAA16Q6N069 864 aaPredicted RBP6.34□□□□□ -1.4
CSMD1-215ENST00000537824 SDCCAG8Q86SQ7 713 aaPredicted RBP6.34□□□□□ -1.4
CSMD1-215ENST00000537824 PSMB7Q99436 277 aa6.34□□□□□ -1.4
CSMD1-215ENST00000537824 PALMDQ9NP74 551 aa6.34□□□□□ -1.4
CSMD1-215ENST00000537824 TMEM63CQ9P1W3 806 aa6.34□□□□□ -1.4
CSMD1-215ENST00000537824 SVILO95425 2214 aa6.34□□□□□ -1.4
CSMD1-215ENST00000537824 PSMD2Q13200 908 aa6.34□□□□□ -1.4
CSMD1-215ENST00000537824 CYP26C1Q6V0L0 522 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms