RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 BICC1Q9H694 974 aaKnown RBP17.26■□□□□ 0.35
COPS7A-206ENST00000537022 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
COPS7A-206ENST00000537022 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
COPS7A-206ENST00000537022 CRKP46108 304 aa17.25■□□□□ 0.35
COPS7A-206ENST00000537022 TNNI2P48788 182 aa17.25■□□□□ 0.35
COPS7A-206ENST00000537022 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
COPS7A-206ENST00000537022 TRIM17Q9Y577 477 aa17.25■□□□□ 0.35
COPS7A-206ENST00000537022 PTPRCP08575 1304 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 CRHR2Q13324 411 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
COPS7A-206ENST00000537022 VPS37DQ86XT2 251 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
COPS7A-206ENST00000537022 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.24■□□□□ 0.35
COPS7A-206ENST00000537022 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 PDE8BO95263 885 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.23■□□□□ 0.35
COPS7A-206ENST00000537022 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
COPS7A-206ENST00000537022 PTPN18Q99952 460 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 MRIQ9BWK5 157 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 PCDH10Q9P2E7 1040 aa17.23■□□□□ 0.35
COPS7A-206ENST00000537022 TCP10L2B9ZVM9 353 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 LRRC24Q50LG9 513 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.22■□□□□ 0.35
COPS7A-206ENST00000537022 TEKT1Q969V4 418 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 PTPN22Q9Y2R2 807 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
COPS7A-206ENST00000537022 KIAA0100Q14667 2235 aaKnown RBP17.21■□□□□ 0.35
COPS7A-206ENST00000537022 MAP3K9P80192 1104 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 SP3Q02447 781 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 VGLL4Q14135 290 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 GRIK5Q16478 980 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 CDAN1Q8IWY9 1227 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 CD99L2Q8TCZ2 262 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 CENPFP49454 3210 aa17.21■□□□□ 0.35
COPS7A-206ENST00000537022 MAST3O60307 1309 aa17.21■□□□□ 0.34
COPS7A-206ENST00000537022 RPAP1Q9BWH6 1393 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-206ENST00000537022 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-206ENST00000537022 GTF2A2P52657 109 aa17.2■□□□□ 0.34
COPS7A-206ENST00000537022 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-206ENST00000537022 FKBP1CQ5VVH2 108 aa17.2■□□□□ 0.34
COPS7A-206ENST00000537022 FAM83AQ86UY5 434 aa17.2■□□□□ 0.34
COPS7A-206ENST00000537022 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
COPS7A-206ENST00000537022 EFCC1Q9HA90 598 aa17.2■□□□□ 0.34
COPS7A-206ENST00000537022 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-206ENST00000537022 CSADQ9Y600 493 aa17.2■□□□□ 0.34
COPS7A-206ENST00000537022 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
COPS7A-206ENST00000537022 PUM3Q15397 648 aaKnown RBP17.19■□□□□ 0.34
COPS7A-206ENST00000537022 BRI3BPQ8WY22 251 aa17.19■□□□□ 0.34
COPS7A-206ENST00000537022 ARMC5Q96C12 935 aa17.19■□□□□ 0.34
COPS7A-206ENST00000537022 HOOK2Q96ED9 719 aa17.19■□□□□ 0.34
COPS7A-206ENST00000537022 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
COPS7A-206ENST00000537022 TMOD2Q9NZR1 351 aa17.19■□□□□ 0.34
COPS7A-206ENST00000537022 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
COPS7A-206ENST00000537022 SPDYE5A6NIY4 337 aa17.18■□□□□ 0.34
COPS7A-206ENST00000537022 E9PSI1 815 aa17.18■□□□□ 0.34
COPS7A-206ENST00000537022 IFIT1P09914 478 aaKnown RBP17.18■□□□□ 0.34
COPS7A-206ENST00000537022 FGFR2P21802 821 aa17.18■□□□□ 0.34
COPS7A-206ENST00000537022 CCL15Q16663 113 aa17.18■□□□□ 0.34
COPS7A-206ENST00000537022 BCAMP50895 628 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 ARHGEF6Q15052 776 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 TAF1CQ15572 869 aaPredicted RBP17.17■□□□□ 0.34
COPS7A-206ENST00000537022 HHIPL2Q6UWX4 724 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 KLHDC4Q8TBB5 520 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 ZFYVE28Q9HCC9 887 aa17.17■□□□□ 0.34
COPS7A-206ENST00000537022 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
COPS7A-206ENST00000537022 CACNB3P54284 484 aa17.16■□□□□ 0.34
COPS7A-206ENST00000537022 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
COPS7A-206ENST00000537022 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
COPS7A-206ENST00000537022 SNCAIPQ9Y6H5 919 aa17.16■□□□□ 0.34
COPS7A-206ENST00000537022 ZSWIM8A7E2V4 1837 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 POTEFA5A3E0 1075 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 EYA2O00167 538 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 WDHD1O75717 1129 aaPredicted RBP17.15■□□□□ 0.34
COPS7A-206ENST00000537022 CETPP11597 493 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
COPS7A-206ENST00000537022 CAP1Q01518 475 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 DCAF15Q66K64 600 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 WDR66Q8TBY9 1149 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 LPIN2Q92539 896 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 WRNIP1Q96S55 665 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
COPS7A-206ENST00000537022 BRCA2P51587 3418 aa17.15■□□□□ 0.34
COPS7A-206ENST00000537022 MYH2Q9UKX2 1941 aa17.14■□□□□ 0.33
COPS7A-206ENST00000537022 SLC5A1P13866 664 aa17.14■□□□□ 0.33
COPS7A-206ENST00000537022 GCC1Q96CN9 775 aa17.14■□□□□ 0.33
COPS7A-206ENST00000537022 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
COPS7A-206ENST00000537022 SLFN5Q08AF3 891 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms