RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 CASP7P55210 303 aa13.85□□□□□ -0.19
CHRNB1-202ENST00000536404 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
CHRNB1-202ENST00000536404 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
CHRNB1-202ENST00000536404 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
CHRNB1-202ENST00000536404 MINPP1Q9UNW1 487 aa13.85□□□□□ -0.19
CHRNB1-202ENST00000536404 POLR2AP24928 1970 aaKnown RBP13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 ECE1P42892 770 aa13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 LBX1P52954 281 aa13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 SAPCD2Q86UD0 394 aa13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 PRDM10Q9NQV6 1147 aa13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
CHRNB1-202ENST00000536404 PRPF40AO75400 957 aaKnown RBP13.83□□□□□ -0.2
CHRNB1-202ENST00000536404 HSPA8P11142 646 aaKnown RBP13.83□□□□□ -0.2
CHRNB1-202ENST00000536404 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.2
CHRNB1-202ENST00000536404 ASTN2O75129 1339 aaPredicted RBP13.83□□□□□ -0.2
CHRNB1-202ENST00000536404 MYH3P11055 1940 aa13.83□□□□□ -0.2
CHRNB1-202ENST00000536404 ADM5C9JUS6 153 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 KIF4BQ2VIQ3 1234 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 PLA2G12BQ9BX93 195 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 SPEF2Q9C093 1822 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 F6X3S4 739 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 CSF1RP07333 972 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 CUL4AQ13619 759 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 KRT26Q7Z3Y9 468 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 IL17RAQ96F46 866 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 GMLQ99445 158 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 RBSNQ9H1K0 784 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 AOX1Q06278 1338 aa13.82□□□□□ -0.2
CHRNB1-202ENST00000536404 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 GNAI3P08754 354 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 ZSCAN20P17040 1043 aaPredicted RBP13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 ITGA6P23229 1130 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 BRD2P25440 801 aaKnown RBP13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 IGHMBP2P38935 993 aaKnown RBP13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 UVSSAQ2YD98 709 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 DCPSQ96C86 337 aaKnown RBP13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 MXD3Q9BW11 206 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 CACNA1FO60840 1977 aa13.81□□□□□ -0.2
CHRNB1-202ENST00000536404 UQCRHLA0A096LP55 91 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 GNAI2P04899 355 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 UQCRHP07919 91 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 PDE1AP54750 535 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 PODNQ7Z5L7 613 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 TXNRD3Q86VQ6 643 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 AGBL3Q8NEM8 1001 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
CHRNB1-202ENST00000536404 BRD1O95696 1058 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 MAP2K2P36507 400 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 SCARF1Q14162 830 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 HHIPL1Q96JK4 782 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 GGA3Q9NZ52 723 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 USP17L8P0C7I0 530 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 KLRK1P26718 216 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 NEK4P51957 841 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 HUNKP57058 714 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 FOXO4P98177 505 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 GPT2Q8TD30 523 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 TMX3Q96JJ7 454 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 ESYT1Q9BSJ8 1104 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 TSKSQ9UJT2 592 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 LEMD3Q9Y2U8 911 aa13.79□□□□□ -0.2
CHRNB1-202ENST00000536404 THSD7BQ9C0I4 1608 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 PSME4Q14997 1843 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 EPHA10Q5JZY3 1008 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 DACT2Q5SW24 774 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 MPHOSPH8Q99549 860 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 ANKRD2Q9GZV1 360 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 GBA2Q9HCG7 927 aaPredicted RBP13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 MYOZ2Q9NPC6 264 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 SCAF8Q9UPN6 1271 aaKnown RBP13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
CHRNB1-202ENST00000536404 ZNF609O15014 1411 aa13.77□□□□□ -0.2
CHRNB1-202ENST00000536404 ANKRD18BA2A2Z9 1011 aa13.77□□□□□ -0.21
CHRNB1-202ENST00000536404 SNAP23O00161 211 aa13.77□□□□□ -0.21
CHRNB1-202ENST00000536404 SULF1Q8IWU6 871 aa13.77□□□□□ -0.21
CHRNB1-202ENST00000536404 ZGPATQ8N5A5 531 aaKnown RBP13.77□□□□□ -0.21
CHRNB1-202ENST00000536404 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.21
CHRNB1-202ENST00000536404 MEIS3Q99687 375 aa13.77□□□□□ -0.21
CHRNB1-202ENST00000536404 COA1Q9GZY4 146 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms