RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 NBPF14Q5TI25 921 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 NBPF6Q5VWK0 638 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 RUFY3Q7L099 469 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 USP48Q86UV5 1035 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 ERC1Q8IUD2 1116 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 FAM184AQ8NB25 1140 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 KCNH5Q8NCM2 988 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 ZSCAN31Q96LW9 406 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 NBPF4Q96M43 638 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 LGR6Q9HBX8 967 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 CHPF2Q9P2E5 772 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 RGPD8O14715 1765 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 LMO7Q8WWI1 1683 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 PI4KAP2A4QPH2 592 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 RNMTO43148 476 aaKnown RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 KCNQ3O43525 872 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 GADD45BO75293 160 aaPredicted RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 UBE2HP62256 183 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 PTK2Q05397 1052 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 KCNA1Q09470 495 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 SCARF1Q14162 830 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 AMOTQ4VCS5 1084 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 CCDC183Q5T5S1 534 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 VPS53Q5VIR6 699 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 MRPL14Q6P1L8 145 aaKnown RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 PDXDC2PQ6P474 469 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 PI4KAP1Q8N8J0 262 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 LTV1Q96GA3 475 aaPredicted RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 FUCA2Q9BTY2 467 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 SH2B1Q9NRF2 756 aaPredicted RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 ECHDC1Q9NTX5 307 aa6.85□□□□□ -1.31
VPS33A-203ENST00000536212 DBF4Q9UBU7 674 aaPredicted RBP6.85□□□□□ -1.31
VPS33A-203ENST00000536212 BTBD11A6QL63 1104 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 STX6O43752 255 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 GIGYF1O75420 1035 aaPredicted RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 F13A1P00488 732 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 EIF2S2P20042 333 aaKnown RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 HSP90AA2PQ14568 343 aaPredicted RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 NECTIN1Q15223 517 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 NUTM2GQ5VZR2 741 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 KSR2Q6VAB6 950 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 NOL8Q76FK4 1167 aaKnown RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 CLASRPQ8N2M8 674 aaKnown RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 USHBP1Q8N6Y0 703 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 ZNF592Q92610 1267 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 EVI5LQ96CN4 794 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 MTMR6Q9Y217 621 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 ATP6V1DQ9Y5K8 247 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 MAFBQ9Y5Q3 323 aaPredicted RBP6.84□□□□□ -1.31
VPS33A-203ENST00000536212 SLIT3O75094 1523 aa6.84□□□□□ -1.31
VPS33A-203ENST00000536212 HIP1O00291 1037 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 ATP9BO43861 1147 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 MAP4K4O95819 1239 aaPredicted RBP6.83□□□□□ -1.32
VPS33A-203ENST00000536212 SYT1P21579 422 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 SH3BP2P78314 561 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 PTH1RQ03431 593 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 TEFQ10587 303 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 ST3GAL1Q11201 340 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 PTCRAQ6ISU1 281 aaPredicted RBP6.83□□□□□ -1.32
VPS33A-203ENST00000536212 ZNF530Q6P9A1 599 aaPredicted RBP6.83□□□□□ -1.32
VPS33A-203ENST00000536212 ARHGEF25Q86VW2 580 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 MPNDQ8N594 471 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 LINS1Q8NG48 757 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 GPATCH3Q96I76 525 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 PDCL3Q9H2J4 239 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 DIAPH3Q9NSV4 1193 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 PDRG1Q9NUG6 133 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 SMC3Q9UQE7 1217 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 CNPY2Q9Y2B0 182 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 MRC1P22897 1456 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 ADAMTS7Q9UKP4 1686 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 CAMTA1Q9Y6Y1 1673 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 MST1RQ04912 1400 aa6.83□□□□□ -1.32
VPS33A-203ENST00000536212 JCADQ9P266 1359 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 CCDC171Q6TFL3 1326 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 AK9Q5TCS8 1911 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 GRM8O00222 908 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 LARGE1O95461 756 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 CSB-PGBD3P0DP91 1061 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 HSP90B1P14625 803 aaKnown RBP6.82□□□□□ -1.32
VPS33A-203ENST00000536212 MCCD1P59942 119 aaPredicted RBP6.82□□□□□ -1.32
VPS33A-203ENST00000536212 XPCQ01831 940 aaPredicted RBP6.82□□□□□ -1.32
VPS33A-203ENST00000536212 ADCK5Q3MIX3 580 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 TSGA10IPQ3SY00 556 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 CWC27Q6UX04 472 aaKnown RBP6.82□□□□□ -1.32
VPS33A-203ENST00000536212 NFATC2IPQ8NCF5 419 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 RNF214Q8ND24 703 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 MAP4K1Q92918 833 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 KAZALD1Q96I82 304 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 SUCLG2Q96I99 432 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 PURBQ96QR8 312 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms