RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 CRHR2Q13324 411 aa13.99□□□□□ -0.17
LMO3-213ENST00000536172 SLC4A10Q6U841 1118 aa13.99□□□□□ -0.17
LMO3-213ENST00000536172 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
LMO3-213ENST00000536172 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
LMO3-213ENST00000536172 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
LMO3-213ENST00000536172 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
LMO3-213ENST00000536172 WDHD1O75717 1129 aaPredicted RBP13.98□□□□□ -0.17
LMO3-213ENST00000536172 CRKP46108 304 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 GYG1P46976 350 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 GTF2A2P52657 109 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 CAVIN4Q5BKX8 364 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 MRIQ9BWK5 157 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 TDRD3Q9H7E2 651 aaKnown RBP13.98□□□□□ -0.17
LMO3-213ENST00000536172 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
LMO3-213ENST00000536172 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 SALL2Q9Y467 1007 aaPredicted RBP13.98□□□□□ -0.17
LMO3-213ENST00000536172 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 CSADQ9Y600 493 aa13.98□□□□□ -0.17
LMO3-213ENST00000536172 GJA5P36382 358 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 MAP3K9P80192 1104 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 FBXO33Q7Z6M2 555 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 ARMC5Q96C12 935 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 TEPSINQ96N21 525 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 PTPN18Q99952 460 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 SUGT1Q9Y2Z0 365 aa13.97□□□□□ -0.17
LMO3-213ENST00000536172 MAST3O60307 1309 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 AOX1Q06278 1338 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 KIF16BQ96L93 1317 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 FRAT2O75474 233 aaPredicted RBP13.96□□□□□ -0.17
LMO3-213ENST00000536172 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
LMO3-213ENST00000536172 FKBP1CQ5VVH2 108 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.96□□□□□ -0.17
LMO3-213ENST00000536172 NBPF11Q86T75 865 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 ZFYVE28Q9HCC9 887 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 ZCCHC17Q9NP64 241 aaKnown RBP13.96□□□□□ -0.17
LMO3-213ENST00000536172 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.17
LMO3-213ENST00000536172 TCP10L2B9ZVM9 353 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 PDE8BO95263 885 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 NBPF7P0C2Y1 421 aaPredicted RBP13.95□□□□□ -0.18
LMO3-213ENST00000536172 VGLL4Q14135 290 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.95□□□□□ -0.18
LMO3-213ENST00000536172 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 SUCLG2Q96I99 432 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
LMO3-213ENST00000536172 TMEM39BQ9GZU3 492 aa13.95□□□□□ -0.18
LMO3-213ENST00000536172 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
LMO3-213ENST00000536172 PTPRCP08575 1304 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
LMO3-213ENST00000536172 HTTP42858 3142 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 CCL15-CCL14A0A0B4J2E2 113 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
LMO3-213ENST00000536172 CCL15Q16663 113 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 ZDHHC15Q96MV8 337 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
LMO3-213ENST00000536172 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
LMO3-213ENST00000536172 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 SPDYE5A6NIY4 337 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 GNRH1P01148 92 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 CETPP11597 493 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 ERO1BQ86YB8 467 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
LMO3-213ENST00000536172 RPAP1Q9BWH6 1393 aaPredicted RBP13.93□□□□□ -0.18
LMO3-213ENST00000536172 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 IFIT1P09914 478 aaKnown RBP13.92□□□□□ -0.18
LMO3-213ENST00000536172 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
LMO3-213ENST00000536172 KIF22Q14807 665 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
LMO3-213ENST00000536172 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 HHIPL2Q6UWX4 724 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
LMO3-213ENST00000536172 CENPFP49454 3210 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 TLR2O60603 784 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 PRMT2P55345 433 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 SNAPC2Q13487 334 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 ZNF333Q96JL9 665 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
LMO3-213ENST00000536172 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
LMO3-213ENST00000536172 PPIL2Q13356 520 aa13.9□□□□□ -0.18
LMO3-213ENST00000536172 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
LMO3-213ENST00000536172 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
LMO3-213ENST00000536172 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
LMO3-213ENST00000536172 WRNIP1Q96S55 665 aa13.9□□□□□ -0.18
LMO3-213ENST00000536172 ZNF521Q96K83 1311 aa13.9□□□□□ -0.19
LMO3-213ENST00000536172 SLC5A1P13866 664 aa13.89□□□□□ -0.19
LMO3-213ENST00000536172 BCAMP50895 628 aa13.89□□□□□ -0.19
LMO3-213ENST00000536172 PPATQ06203 517 aa13.89□□□□□ -0.19
LMO3-213ENST00000536172 GRIK5Q16478 980 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms