RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 MKRN1Q9UHC7 482 aaKnown RBP6.62□□□□□ -1.35
YBX3-205ENST00000536107 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
YBX3-205ENST00000536107 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
YBX3-205ENST00000536107 UGGT1Q9NYU2 1555 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 FGD6Q6ZV73 1430 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 XYLBO75191 536 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 DGKZQ13574 1117 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 CPSF6Q16630 551 aaKnown RBP eCLIP6.61□□□□□ -1.35
YBX3-205ENST00000536107 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 NFXL1Q6ZNB6 911 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 GIMAP7Q8NHV1 300 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 ZNF594Q96JF6 807 aaPredicted RBP6.61□□□□□ -1.35
YBX3-205ENST00000536107 EID1Q9Y6B2 187 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 PHLPP1O60346 1717 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 IQGAP1P46940 1657 aa6.61□□□□□ -1.35
YBX3-205ENST00000536107 MIA2Q96PC5 1412 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 STRCP1A6NGW2 1772 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 WASHC2CQ9Y4E1 1318 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 FOSL1P15407 271 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 KCNA6P17658 529 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 RASA1P20936 1047 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 IGFBP4P22692 258 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 C1QTNF8P60827 252 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 VSIG10LQ86VR7 867 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 KLHL23Q8NBE8 558 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 BCANQ96GW7 911 aa6.6□□□□□ -1.35
YBX3-205ENST00000536107 ITSN2Q9NZM3 1697 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 DEPDC5O75140 1603 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 DBX1A6NMT0 343 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 OPLAHO14841 1288 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 SART1O43290 800 aaKnown RBP6.59□□□□□ -1.35
YBX3-205ENST00000536107 HNRNPMP52272 730 aaKnown RBP eCLIP6.59□□□□□ -1.35
YBX3-205ENST00000536107 SEC13P55735 322 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 ANKRD34AQ69YU3 496 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 MFSD14AQ96MC6 490 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 ATG3Q9NT62 314 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 TRPC5Q9UL62 973 aaPredicted RBP6.59□□□□□ -1.35
YBX3-205ENST00000536107 LEMD3Q9Y2U8 911 aa6.59□□□□□ -1.35
YBX3-205ENST00000536107 A2MP01023 1474 aa6.59□□□□□ -1.36
YBX3-205ENST00000536107 NLRP1Q9C000 1473 aa6.59□□□□□ -1.36
YBX3-205ENST00000536107 ATP9BO43861 1147 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 LTKP29376 864 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 PREPP48147 710 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 COL19A1Q14993 1142 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 C11orf91Q3C1V1 193 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 TP53INP2Q8IXH6 220 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 CCER1Q8TC90 406 aaPredicted RBP6.58□□□□□ -1.36
YBX3-205ENST00000536107 USP20Q9Y2K6 914 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 MYO5CQ9NQX4 1742 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 CLIP1P30622 1438 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 LRP5O75197 1615 aa6.58□□□□□ -1.36
YBX3-205ENST00000536107 FSCN2O14926 492 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 KIF3BO15066 747 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 CDC27P30260 824 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 TXNDC11Q6PKC3 985 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 FOXD4L4Q8WXT5 416 aaPredicted RBP6.57□□□□□ -1.36
YBX3-205ENST00000536107 MYO19Q96H55 970 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 SLC26A8Q96RN1 970 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 COG6Q9Y2V7 657 aa6.57□□□□□ -1.36
YBX3-205ENST00000536107 ATP7AQ04656 1500 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 SCAF11Q99590 1463 aaKnown RBP6.56□□□□□ -1.36
YBX3-205ENST00000536107 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 ATF3P18847 181 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 MCM6Q14566 821 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 R3HDM1Q15032 1099 aaKnown RBP6.56□□□□□ -1.36
YBX3-205ENST00000536107 ZNF648Q5T619 568 aaPredicted RBP6.56□□□□□ -1.36
YBX3-205ENST00000536107 FAM117BQ6P1L5 589 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 WWC1Q8IX03 1113 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 CMTR1Q8N1G2 835 aaKnown RBP6.56□□□□□ -1.36
YBX3-205ENST00000536107 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 PPP1R1BQ9UD71 204 aaPredicted RBP6.56□□□□□ -1.36
YBX3-205ENST00000536107 KCNMB2Q9Y691 235 aa6.56□□□□□ -1.36
YBX3-205ENST00000536107 BLMP54132 1417 aaPredicted RBP6.56□□□□□ -1.36
YBX3-205ENST00000536107 PZPP20742 1482 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 KIDINS220Q9ULH0 1771 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 ADAM11O75078 769 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 F13BP05160 661 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 RGL4Q8IZJ4 473 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 AGBL5Q8NDL9 886 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 UBASH3BQ8TF42 649 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 COL26A1Q96A83 441 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 UCN2Q96RP3 112 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 OSBPL1AQ9BXW6 950 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 LACRTQ9GZZ8 138 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 RNF208Q9H0X6 261 aa6.55□□□□□ -1.36
YBX3-205ENST00000536107 COL16A1Q07092 1604 aaPredicted RBP6.54□□□□□ -1.36
YBX3-205ENST00000536107 KIF14Q15058 1648 aa6.54□□□□□ -1.36
YBX3-205ENST00000536107 SAMD9Q5K651 1589 aa6.54□□□□□ -1.36
YBX3-205ENST00000536107 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
YBX3-205ENST00000536107 SMNDC1O75940 238 aaKnown RBP eCLIP6.54□□□□□ -1.36
YBX3-205ENST00000536107 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
YBX3-205ENST00000536107 LRRC59Q96AG4 307 aaKnown RBP6.54□□□□□ -1.36
YBX3-205ENST00000536107 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
YBX3-205ENST00000536107 NWD1Q149M9 1564 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 TROQ12816 1431 aaPredicted RBP6.53□□□□□ -1.36
YBX3-205ENST00000536107 PAPLNO95428 1278 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 MAP4P27816 1152 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms