RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 IREB2P48200 963 aaKnown RBP25.87■■□□□ 1.73
LTBR-205ENST00000535739 TNFAIP1Q13829 316 aa25.87■■□□□ 1.73
LTBR-205ENST00000535739 IFNL1Q8IU54 200 aa25.87■■□□□ 1.73
LTBR-205ENST00000535739 UNCXA6NJT0 531 aa25.86■■□□□ 1.73
LTBR-205ENST00000535739 INHBEP58166 350 aa25.86■■□□□ 1.73
LTBR-205ENST00000535739 CAVIN4Q5BKX8 364 aa25.86■■□□□ 1.73
LTBR-205ENST00000535739 CDCA7LQ96GN5 454 aa25.86■■□□□ 1.73
LTBR-205ENST00000535739 TCP10L2B9ZVM9 353 aa25.85■■□□□ 1.73
LTBR-205ENST00000535739 FRAT2O75474 233 aaPredicted RBP25.85■■□□□ 1.73
LTBR-205ENST00000535739 ALDH1A1P00352 501 aa25.85■■□□□ 1.73
LTBR-205ENST00000535739 GJA5P36382 358 aa25.85■■□□□ 1.73
LTBR-205ENST00000535739 CDAN1Q8IWY9 1227 aa25.85■■□□□ 1.73
LTBR-205ENST00000535739 IGF2BP3O00425 579 aaKnown RBP eCLIP25.84■■□□□ 1.73
LTBR-205ENST00000535739 BCAMP50895 628 aa25.84■■□□□ 1.73
LTBR-205ENST00000535739 ANKRD13AQ8IZ07 590 aa25.84■■□□□ 1.73
LTBR-205ENST00000535739 TEPSINQ96N21 525 aa25.84■■□□□ 1.73
LTBR-205ENST00000535739 MYH13Q9UKX3 1938 aa25.83■■□□□ 1.73
LTBR-205ENST00000535739 ALDH1L2Q3SY69 923 aa25.83■■□□□ 1.73
LTBR-205ENST00000535739 TMEM39BQ9GZU3 492 aa25.83■■□□□ 1.73
LTBR-205ENST00000535739 TBC1D22AQ8WUA7 517 aa25.82■■□□□ 1.72
LTBR-205ENST00000535739 ELP3Q9H9T3 547 aa25.82■■□□□ 1.72
LTBR-205ENST00000535739 SMC4Q9NTJ3 1288 aa25.82■■□□□ 1.72
LTBR-205ENST00000535739 HTTP42858 3142 aa25.82■■□□□ 1.72
LTBR-205ENST00000535739 FGFR2P21802 821 aa25.81■■□□□ 1.72
LTBR-205ENST00000535739 RFX5P48382 616 aaPredicted RBP25.81■■□□□ 1.72
LTBR-205ENST00000535739 FBXO46Q6PJ61 603 aaPredicted RBP25.81■■□□□ 1.72
LTBR-205ENST00000535739 TNNI2P48788 182 aa25.8■■□□□ 1.72
LTBR-205ENST00000535739 HDLBPQ00341 1268 aaKnown RBP25.8■■□□□ 1.72
LTBR-205ENST00000535739 PUM3Q15397 648 aaKnown RBP25.8■■□□□ 1.72
LTBR-205ENST00000535739 TEKT1Q969V4 418 aa25.8■■□□□ 1.72
LTBR-205ENST00000535739 IFIT1P09914 478 aaKnown RBP25.79■■□□□ 1.72
LTBR-205ENST00000535739 CACNB3P54284 484 aa25.79■■□□□ 1.72
LTBR-205ENST00000535739 OPTNQ96CV9 577 aa25.79■■□□□ 1.72
LTBR-205ENST00000535739 CENPFP49454 3210 aa25.78■■□□□ 1.72
LTBR-205ENST00000535739 EYA2O00167 538 aa25.78■■□□□ 1.72
LTBR-205ENST00000535739 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.78■■□□□ 1.72
LTBR-205ENST00000535739 TRMT2AQ8IZ69 625 aaKnown RBP25.78■■□□□ 1.72
LTBR-205ENST00000535739 PTPN18Q99952 460 aa25.78■■□□□ 1.72
LTBR-205ENST00000535739 OTUD7BQ6GQQ9 843 aa25.77■■□□□ 1.72
LTBR-205ENST00000535739 CNKSR2Q8WXI2 1034 aa25.77■■□□□ 1.72
LTBR-205ENST00000535739 KIF16BQ96L93 1317 aa25.77■■□□□ 1.72
LTBR-205ENST00000535739 CRHR2Q13324 411 aa25.76■■□□□ 1.71
LTBR-205ENST00000535739 ZDHHC15Q96MV8 337 aa25.76■■□□□ 1.71
LTBR-205ENST00000535739 TESPA1A2RU30 521 aaPredicted RBP25.75■■□□□ 1.71
LTBR-205ENST00000535739 SLC5A1P13866 664 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 MAP3K9P80192 1104 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 VGLL4Q14135 290 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 ATG9AQ7Z3C6 839 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.75■■□□□ 1.71
LTBR-205ENST00000535739 MS4A4AQ96JQ5 239 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 MRIQ9BWK5 157 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 TRIM17Q9Y577 477 aa25.75■■□□□ 1.71
LTBR-205ENST00000535739 APOBEC3HQ6NTF7 200 aaKnown RBP25.74■■□□□ 1.71
LTBR-205ENST00000535739 LPIN2Q92539 896 aa25.74■■□□□ 1.71
LTBR-205ENST00000535739 SIL1Q9H173 461 aa25.74■■□□□ 1.71
LTBR-205ENST00000535739 NOB1Q9ULX3 412 aaKnown RBP25.74■■□□□ 1.71
LTBR-205ENST00000535739 SUGT1Q9Y2Z0 365 aa25.74■■□□□ 1.71
LTBR-205ENST00000535739 MAST3O60307 1309 aa25.73■■□□□ 1.71
LTBR-205ENST00000535739 UBTFL1P0CB47 393 aaPredicted RBP25.73■■□□□ 1.71
LTBR-205ENST00000535739 OTOP1Q7RTM1 612 aa25.73■■□□□ 1.71
LTBR-205ENST00000535739 TMOD2Q9NZR1 351 aa25.73■■□□□ 1.71
LTBR-205ENST00000535739 CSADQ9Y600 493 aa25.72■■□□□ 1.71
LTBR-205ENST00000535739 AK9Q5TCS8 1911 aa25.72■■□□□ 1.71
LTBR-205ENST00000535739 HHIPL2Q6UWX4 724 aa25.71■■□□□ 1.71
LTBR-205ENST00000535739 FAM83AQ86UY5 434 aa25.71■■□□□ 1.71
LTBR-205ENST00000535739 WDR66Q8TBY9 1149 aa25.71■■□□□ 1.71
LTBR-205ENST00000535739 CD99L2Q8TCZ2 262 aa25.71■■□□□ 1.71
LTBR-205ENST00000535739 BRI3BPQ8WY22 251 aa25.71■■□□□ 1.71
LTBR-205ENST00000535739 CT47B1P0C2W7 299 aaPredicted RBP25.7■■□□□ 1.7
LTBR-205ENST00000535739 OTUD5Q96G74 571 aa25.7■■□□□ 1.7
LTBR-205ENST00000535739 ERO1AQ96HE7 468 aa25.7■■□□□ 1.7
LTBR-205ENST00000535739 CCL15-CCL14A0A0B4J2E2 113 aa25.69■■□□□ 1.7
LTBR-205ENST00000535739 GTF2A2P52657 109 aa25.69■■□□□ 1.7
LTBR-205ENST00000535739 CCL15Q16663 113 aa25.69■■□□□ 1.7
LTBR-205ENST00000535739 ATP2B3Q16720 1220 aa25.69■■□□□ 1.7
LTBR-205ENST00000535739 FKBP1CQ5VVH2 108 aa25.69■■□□□ 1.7
LTBR-205ENST00000535739 CEP126Q9P2H0 1117 aa25.69■■□□□ 1.7
LTBR-205ENST00000535739 LRRFIP2Q9Y608 721 aaKnown RBP25.69■■□□□ 1.7
LTBR-205ENST00000535739 CIAO1O76071 339 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 SLC34A2O95436 690 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 CAP1Q01518 475 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 SP3Q02447 781 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 WRNIP1Q96S55 665 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 API5Q9BZZ5 524 aaKnown RBP25.68■■□□□ 1.7
LTBR-205ENST00000535739 FBXO3Q9UK99 471 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 SNCAIPQ9Y6H5 919 aa25.68■■□□□ 1.7
LTBR-205ENST00000535739 MKI67P46013 3256 aaKnown RBP25.68■■□□□ 1.7
LTBR-205ENST00000535739 KIAA0100Q14667 2235 aaKnown RBP25.67■■□□□ 1.7
LTBR-205ENST00000535739 ZKSCAN4Q969J2 545 aaPredicted RBP25.67■■□□□ 1.7
LTBR-205ENST00000535739 PA2G4Q9UQ80 394 aaKnown RBP25.67■■□□□ 1.7
LTBR-205ENST00000535739 SPDYE5A6NIY4 337 aa25.66■■□□□ 1.7
LTBR-205ENST00000535739 PRDX5P30044 214 aa25.66■■□□□ 1.7
LTBR-205ENST00000535739 TAF1CQ15572 869 aaPredicted RBP25.66■■□□□ 1.7
LTBR-205ENST00000535739 DIXDC1Q155Q3 683 aa25.66■■□□□ 1.7
LTBR-205ENST00000535739 DIEXFQ68CQ4 756 aaKnown RBP25.66■■□□□ 1.7
LTBR-205ENST00000535739 FAM43AQ8N2R8 423 aa25.66■■□□□ 1.7
LTBR-205ENST00000535739 PTPN22Q9Y2R2 807 aa25.66■■□□□ 1.7
LTBR-205ENST00000535739 DAGLAQ9Y4D2 1042 aa25.66■■□□□ 1.7
LTBR-205ENST00000535739 MIGA2Q7L4E1 593 aa25.65■■□□□ 1.7
LTBR-205ENST00000535739 HOOK2Q96ED9 719 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms