RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TDRD9Q8NDG6 1382 aaKnown RBP5.15□□□□□ -1.59
SNHG1-202ENST00000535689 NFKBIEO00221 500 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 GNB5O14775 395 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 PCDH1Q08174 1060 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 C19orf57Q0VDD7 668 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 TRIM28Q13263 835 aaKnown RBP5.14□□□□□ -1.59
SNHG1-202ENST00000535689 GRIN2CQ14957 1233 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 COL13A1Q5TAT6 717 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-202ENST00000535689 C1orf229Q6ZS94 237 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-202ENST00000535689 ZNF654Q8IZM8 581 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 FBXO41Q8TF61 875 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 LACRTQ9GZZ8 138 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 ZNF576Q9H609 170 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 KLF15Q9UIH9 416 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 GGT7Q9UJ14 662 aa5.14□□□□□ -1.59
SNHG1-202ENST00000535689 IRS1P35568 1242 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 ATP11AP98196 1134 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 SUZ12Q15022 739 aaKnown RBP5.13□□□□□ -1.59
SNHG1-202ENST00000535689 C20orf204Q6ZNR8 217 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 GLIS3Q8NEA6 775 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 CORO1BQ9BR76 489 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 CCSER2Q9H7U1 834 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 SOX13Q9UN79 622 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 CCDC88BA6NC98 1476 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 POLA1P09884 1462 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-202ENST00000535689 SNAPC4Q5SXM2 1469 aa5.13□□□□□ -1.59
SNHG1-202ENST00000535689 B3GALT4O96024 378 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 NME2P22392 152 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 ERCC5P28715 1186 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-202ENST00000535689 GSK3AP49840 483 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 AFF1P51825 1210 aaKnown RBP5.12□□□□□ -1.59
SNHG1-202ENST00000535689 CCDC84Q86UT8 332 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-202ENST00000535689 FAM161BQ96MY7 647 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 TGIF2Q9GZN2 237 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 LATS2Q9NRM7 1088 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 KIAA1522Q9P206 1035 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-202ENST00000535689 ROBO2Q9HCK4 1378 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 ERCC6L2Q5T890 1561 aa5.12□□□□□ -1.59
SNHG1-202ENST00000535689 UNCXA6NJT0 531 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 SHISA8B8ZZ34 492 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 RECKO95980 971 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 ALBP02768 609 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 SLFN14P0C7P3 912 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 ESRRAP11474 423 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 GRIA4P48058 902 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 ZC3H6P61129 1189 aaKnown RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 TAGLNQ01995 201 aaKnown RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 NRG1Q02297 640 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 COL9A2Q14055 689 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 SF3A1Q15459 793 aaKnown RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 PI16Q6UXB8 463 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 USP48Q86UV5 1035 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 NECAB3Q96P71 396 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-202ENST00000535689 KRT82Q9NSB4 513 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 TRIM33Q9UPN9 1127 aa5.11□□□□□ -1.59
SNHG1-202ENST00000535689 FSCN2O14926 492 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 KDM6BO15054 1643 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 APBA3O96018 575 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 ARNTP27540 789 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 GBP2P32456 591 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-202ENST00000535689 GSTM4Q03013 218 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 MLECQ14165 292 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 IGF2-ASQ6U949 168 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 TPTE2Q6XPS3 522 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 C3orf58Q8NDZ4 430 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 SLC7A3Q8WY07 619 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 CNTNAP5Q8WYK1 1306 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 C8orf37Q96NL8 207 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 SETDB2Q96T68 719 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 MIR1-1HGQ9H1L0 117 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 CBX8Q9HC52 389 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 NAGPAQ9UK23 515 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 RAD54L2Q9Y4B4 1467 aa5.1□□□□□ -1.59
SNHG1-202ENST00000535689 ABCC10Q5T3U5 1492 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 SYNGAP1Q96PV0 1343 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 C9orf172C9J069 976 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 LINC01387J3KSC0 135 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 TRIM37O94972 964 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 BPNT1O95861 308 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 SPATA31C1P0DKV0 1188 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 ELNP15502 786 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 CD68P34810 354 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-202ENST00000535689 DGKGP49619 791 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 FANCCQ00597 558 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 POU4F3Q15319 338 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 SPRED3Q2MJR0 410 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 TTBK2Q6IQ55 1244 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 LLGL2Q6P1M3 1020 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 VN1R5Q7Z5H4 357 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 FBXO11Q86XK2 927 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 NT5DC4Q86YG4 428 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 DMRTC2Q8IXT2 367 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-202ENST00000535689 TMEM74Q96NL1 305 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 MRPL18Q9H0U6 180 aaKnown RBP5.09□□□□□ -1.59
SNHG1-202ENST00000535689 CYP4F12Q9HCS2 524 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 RAD18Q9NS91 495 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 STARD13Q9Y3M8 1113 aa5.09□□□□□ -1.59
SNHG1-202ENST00000535689 SUPT16HQ9Y5B9 1047 aaKnown RBP5.09□□□□□ -1.59
SNHG1-202ENST00000535689 TSPOAP1O95153 1857 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms