RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 PRIM1P49642 420 aaKnown RBP10.71□□□□□ -0.69
TNC-210ENST00000535648 CNGA4Q8IV77 575 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 ANKRD2Q9GZV1 360 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 ABCC1P33527 1531 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 DPH6Q7L8W6 267 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 CCDC65Q8IXS2 484 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 MCM9Q9NXL9 1143 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 ZNF569Q5MCW4 686 aa10.71□□□□□ -0.69
TNC-210ENST00000535648 ELP1O95163 1332 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 RAD50Q92878 1312 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 AK2P54819 239 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 SEL1L2Q5TEA6 688 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 IQUBQ8NA54 791 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 CAPN2P17655 700 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 ATP5DP30049 168 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 SNX16P57768 344 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 APOBRQ0VD83 1088 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 TTC31Q49AM3 519 aaPredicted RBP10.71□□□□□ -0.7
TNC-210ENST00000535648 DHX32Q7L7V1 743 aaKnown RBP10.71□□□□□ -0.7
TNC-210ENST00000535648 NBPF11Q86T75 865 aa10.71□□□□□ -0.7
TNC-210ENST00000535648 INTS4Q96HW7 963 aaKnown RBP10.71□□□□□ -0.7
TNC-210ENST00000535648 TNNI2P48788 182 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 KIFAP3Q92845 792 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 LUC7L2Q9Y383 392 aaKnown RBP10.7□□□□□ -0.7
TNC-210ENST00000535648 ZWINTO95229 277 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 ARFGAP2Q8N6H7 521 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 PCDHB15Q9Y5E8 787 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 CCDC160A6NGH7 325 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 CPLX4Q7Z7G2 160 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
TNC-210ENST00000535648 NAP1L3Q99457 506 aaPredicted RBP10.7□□□□□ -0.7
TNC-210ENST00000535648 ZFYVE9O95405 1425 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 EBAG9O00559 213 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 EPB41P11171 864 aaKnown RBP10.7□□□□□ -0.7
TNC-210ENST00000535648 IFT81Q8WYA0 676 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 TRIM7Q9C029 511 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 IFNKQ9P0W0 207 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 FAM169AQ9Y6X4 670 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 MAP3K5Q99683 1374 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 NPHP3Q7Z494 1330 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 SAMD15Q9P1V8 674 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 VPS18Q9P253 973 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 ZMYM4Q5VZL5 1548 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 LDHBP07195 334 aaKnown RBP10.7□□□□□ -0.7
TNC-210ENST00000535648 CFAP157Q5JU67 520 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 LZTFL1Q9NQ48 299 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 HELLSQ9NRZ9 838 aa10.7□□□□□ -0.7
TNC-210ENST00000535648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.7□□□□□ -0.7
TNC-210ENST00000535648 NOL3O60936 208 aaKnown RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 PARP1P09874 1014 aaKnown RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 ACSBG1Q96GR2 724 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 CSRNP2Q9H175 543 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 KARSQ15046 597 aaKnown RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 SETDB1Q15047 1291 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 SV2BQ7L1I2 683 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 HDXQ7Z353 690 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 TRIM14Q14142 442 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 SBNO2Q9Y2G9 1366 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 AKR1B15C9JRZ8 316 aaPredicted RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 CALCOCO2Q13137 446 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 VWA3BQ502W6 1294 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 LINS1Q8NG48 757 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 ZC3H12CQ9C0D7 883 aaKnown RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 CEBPAP49715 358 aaPredicted RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 DCAF17Q5H9S7 520 aaPredicted RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 KCNK9Q9NPC2 374 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
TNC-210ENST00000535648 A0A1B0GUL7 405 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 CHST3Q7LGC8 479 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 CCDC25Q86WR0 208 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 MICALL1Q8N3F8 863 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 GPR161Q8N6U8 529 aaKnown RBP10.69□□□□□ -0.7
TNC-210ENST00000535648 VEZTQ9HBM0 779 aa10.69□□□□□ -0.7
TNC-210ENST00000535648 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 IBTKQ9P2D0 1353 aaPredicted RBP10.68□□□□□ -0.7
TNC-210ENST00000535648 STX17P56962 302 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 FAM76AQ8TAV0 307 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 SEC62Q99442 399 aaKnown RBP10.68□□□□□ -0.7
TNC-210ENST00000535648 PA2G4Q9UQ80 394 aaKnown RBP10.68□□□□□ -0.7
TNC-210ENST00000535648 PLCD1P51178 756 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 TFCP2Q12800 502 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 UBLCP1Q8WVY7 318 aaPredicted RBP10.68□□□□□ -0.7
TNC-210ENST00000535648 SMIM23A6NLE4 172 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
TNC-210ENST00000535648 BAG1Q99933 345 aaPredicted RBP10.68□□□□□ -0.7
TNC-210ENST00000535648 FLT4P35916 1363 aa10.68□□□□□ -0.7
TNC-210ENST00000535648 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms