RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 GTF2IP78347 998 aa27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 MECOMQ03112 1051 aa27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 MFSD14BQ5SR56 506 aa27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 NLGN2Q8NFZ4 835 aa27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 NSUN4Q96CB9 384 aaKnown RBP27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 DBNDD1Q9H9R9 158 aa27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 BCS1LQ9Y276 419 aa27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 RBM8AQ9Y5S9 174 aaKnown RBP27.46■■□□□ 1.99
RBFOX1-206ENST00000535565 ECE2O60344 883 aa27.45■■□□□ 1.99
RBFOX1-206ENST00000535565 FBXW7Q969H0 707 aa27.45■■□□□ 1.99
RBFOX1-206ENST00000535565 DDRGK1Q96HY6 314 aa27.45■■□□□ 1.99
RBFOX1-206ENST00000535565 U3KPZ7 1027 aaPredicted RBP27.45■■□□□ 1.99
RBFOX1-206ENST00000535565 GSTO1P78417 241 aa27.44■■□□□ 1.98
RBFOX1-206ENST00000535565 HSPD1P10809 573 aaKnown RBP27.43■■□□□ 1.98
RBFOX1-206ENST00000535565 RNF20Q5VTR2 975 aa27.43■■□□□ 1.98
RBFOX1-206ENST00000535565 TTLL5Q6EMB2 1281 aa27.43■■□□□ 1.98
RBFOX1-206ENST00000535565 KIF2CQ99661 725 aa27.43■■□□□ 1.98
RBFOX1-206ENST00000535565 MYH2Q9UKX2 1941 aa27.43■■□□□ 1.98
RBFOX1-206ENST00000535565 MBD4O95243 580 aa27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 NECTIN1Q15223 517 aa27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 VPS53Q5VIR6 699 aa27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 FHDC1Q9C0D6 1143 aaPredicted RBP27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 SUGT1Q9Y2Z0 365 aa27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 PSME4Q14997 1843 aa27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 SCN9AQ15858 1988 aa27.42■■□□□ 1.98
RBFOX1-206ENST00000535565 LARGE2Q8N3Y3 721 aa27.41■■□□□ 1.98
RBFOX1-206ENST00000535565 TAOK3Q9H2K8 898 aa27.41■■□□□ 1.98
RBFOX1-206ENST00000535565 MAGEB6P1A0A0J9YX57 407 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 ZKSCAN1P17029 563 aaPredicted RBP27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 GNAT2P19087 354 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 RABEP1Q15276 862 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 SLF2Q8IX21 1173 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 MIGA1Q8NAN2 632 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 ZNF384Q8TF68 577 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 STRBPQ96SI9 672 aaKnown RBP27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 ZNF277Q9NRM2 450 aaPredicted RBP27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 PALD1Q9ULE6 856 aa27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 ZNF646O15015 1829 aaPredicted RBP27.4■■□□□ 1.98
RBFOX1-206ENST00000535565 LDHCP07864 332 aa27.39■■□□□ 1.98
RBFOX1-206ENST00000535565 STRIP1Q5VSL9 837 aa27.39■■□□□ 1.98
RBFOX1-206ENST00000535565 CREB3L3Q68CJ9 461 aa27.39■■□□□ 1.98
RBFOX1-206ENST00000535565 ADGRA1Q86SQ6 560 aa27.39■■□□□ 1.98
RBFOX1-206ENST00000535565 IL17RAQ96F46 866 aa27.39■■□□□ 1.97
RBFOX1-206ENST00000535565 ARMT1Q9H993 441 aa27.39■■□□□ 1.97
RBFOX1-206ENST00000535565 CTNNA3Q9UI47 895 aa27.39■■□□□ 1.97
RBFOX1-206ENST00000535565 IARSP41252 1262 aaKnown RBP27.38■■□□□ 1.97
RBFOX1-206ENST00000535565 FKBP1AP62942 108 aaKnown RBP27.38■■□□□ 1.97
RBFOX1-206ENST00000535565 LCORLQ8N3X6 602 aa27.38■■□□□ 1.97
RBFOX1-206ENST00000535565 KCNB2Q92953 911 aa27.38■■□□□ 1.97
RBFOX1-206ENST00000535565 SNX14Q9Y5W7 946 aa27.38■■□□□ 1.97
RBFOX1-206ENST00000535565 USP17L3A6NCW0 530 aa27.37■■□□□ 1.97
RBFOX1-206ENST00000535565 USP17L4A6NCW7 530 aa27.37■■□□□ 1.97
RBFOX1-206ENST00000535565 SLC27A2O14975 620 aa27.37■■□□□ 1.97
RBFOX1-206ENST00000535565 USP17L1Q7RTZ2 530 aa27.37■■□□□ 1.97
RBFOX1-206ENST00000535565 NOL10Q9BSC4 688 aaKnown RBP27.37■■□□□ 1.97
RBFOX1-206ENST00000535565 APPP05067 770 aa27.36■■□□□ 1.97
RBFOX1-206ENST00000535565 GRIK5Q16478 980 aa27.36■■□□□ 1.97
RBFOX1-206ENST00000535565 RPAP1Q9BWH6 1393 aaPredicted RBP27.36■■□□□ 1.97
RBFOX1-206ENST00000535565 LTBP3Q9NS15 1303 aa27.36■■□□□ 1.97
RBFOX1-206ENST00000535565 NIM1KQ8IY84 436 aa27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 RIOK1Q9BRS2 568 aaKnown RBP27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 SLC4A4Q9Y6R1 1079 aa27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 MROH7-TTC4A0A0A0MT08 1334 aa27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 PATL2C9JE40 543 aaKnown RBP27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 RASEFQ8IZ41 740 aa27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 NACAP1Q9BZK3 213 aa27.35■■□□□ 1.97
RBFOX1-206ENST00000535565 LAMA4Q16363 1823 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 NFKBIEO00221 500 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 FOXP2O15409 715 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 BAG3O95817 575 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 CERS3Q8IU89 383 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 CERS5Q8N5B7 392 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 IPO9Q96P70 1041 aaKnown RBP27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 KCNQ5Q9NR82 932 aa27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 AATFQ9NY61 560 aaKnown RBP eCLIP27.34■■□□□ 1.97
RBFOX1-206ENST00000535565 ZMYM6O95789 1325 aa27.33■■□□□ 1.97
RBFOX1-206ENST00000535565 BECN1Q14457 450 aa27.33■■□□□ 1.97
RBFOX1-206ENST00000535565 DIXDC1Q155Q3 683 aa27.33■■□□□ 1.97
RBFOX1-206ENST00000535565 DACT2Q5SW24 774 aa27.33■■□□□ 1.97
RBFOX1-206ENST00000535565 IL27Q8NEV9 243 aa27.33■■□□□ 1.97
RBFOX1-206ENST00000535565 COL4A5P29400 1685 aa27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 YDJCA8MPS7 323 aa27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 FGAP02671 866 aa27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 DYNLL1P63167 89 aaKnown RBP27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 KRT32Q14532 448 aa27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 IMMTQ16891 758 aaKnown RBP27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 TSGA10IPQ3SY00 556 aa27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 SYT17Q9BSW7 474 aa27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 TTF2Q9UNY4 1162 aaKnown RBP27.32■■□□□ 1.96
RBFOX1-206ENST00000535565 ALX1Q15699 326 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 JDP2Q8WYK2 163 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 FAM163AQ96GL9 167 aaPredicted RBP27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 MXD3Q9BW11 206 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 CRNKL1Q9BZJ0 848 aaKnown RBP27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 ZNRF3Q9ULT6 936 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 CYP21A2P08686 494 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 IFNL3Q8IZI9 196 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 NAPBQ9H115 298 aa27.31■■□□□ 1.96
RBFOX1-206ENST00000535565 GSG1L2A8MUP6 293 aa27.3■■□□□ 1.96
RBFOX1-206ENST00000535565 F8W031 263 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms