RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NKAPLQ5M9Q1 402 aa9.14□□□□□ -0.95
PRKDC-205ENST00000535375 HP1BP3Q5SSJ5 553 aaPredicted RBP9.14□□□□□ -0.95
PRKDC-205ENST00000535375 ANKRD34AQ69YU3 496 aa9.14□□□□□ -0.95
PRKDC-205ENST00000535375 Q6ZS46 218 aa9.14□□□□□ -0.95
PRKDC-205ENST00000535375 CORO1BQ9BR76 489 aa9.14□□□□□ -0.95
PRKDC-205ENST00000535375 SRCIN1Q9C0H9 1055 aa9.14□□□□□ -0.95
PRKDC-205ENST00000535375 LOC100289279A0A1B0GTE1 492 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 H2AFB2P0C5Z0 115 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 MAOBP27338 520 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 GSTT1P30711 240 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 ZNF157P51786 506 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-205ENST00000535375 POU4F3Q15319 338 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 FRMD6Q96NE9 622 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
PRKDC-205ENST00000535375 GPN3Q9UHW5 284 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-205ENST00000535375 MEGF11A6BM72 1044 aa9.12□□□□□ -0.95
PRKDC-205ENST00000535375 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
PRKDC-205ENST00000535375 EXOSC6Q5RKV6 272 aaKnown RBP9.12□□□□□ -0.95
PRKDC-205ENST00000535375 UTP4Q969X6 686 aaKnown RBP9.12□□□□□ -0.95
PRKDC-205ENST00000535375 UBL7Q96S82 380 aaPredicted RBP9.12□□□□□ -0.95
PRKDC-205ENST00000535375 DYRK3O43781 588 aa9.11□□□□□ -0.95
PRKDC-205ENST00000535375 PRPF40AO75400 957 aaKnown RBP9.11□□□□□ -0.95
PRKDC-205ENST00000535375 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
PRKDC-205ENST00000535375 RAD18Q9NS91 495 aa9.11□□□□□ -0.95
PRKDC-205ENST00000535375 TMEM39AQ9NV64 488 aa9.11□□□□□ -0.95
PRKDC-205ENST00000535375 DHX15O43143 795 aaKnown RBP9.1□□□□□ -0.95
PRKDC-205ENST00000535375 GAS2O43903 313 aaKnown RBP9.1□□□□□ -0.95
PRKDC-205ENST00000535375 FAAP100Q0VG06 881 aa9.1□□□□□ -0.95
PRKDC-205ENST00000535375 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
PRKDC-205ENST00000535375 DNAJC14Q6Y2X3 702 aaPredicted RBP9.1□□□□□ -0.95
PRKDC-205ENST00000535375 OSBPL7Q9BZF2 842 aa9.1□□□□□ -0.95
PRKDC-205ENST00000535375 ERCC3P19447 782 aa9.09□□□□□ -0.95
PRKDC-205ENST00000535375 TMPRSS13Q9BYE2 586 aa9.09□□□□□ -0.95
PRKDC-205ENST00000535375 C12orf49Q9H741 205 aa9.09□□□□□ -0.95
PRKDC-205ENST00000535375 FAM8A1Q9UBU6 413 aa9.09□□□□□ -0.95
PRKDC-205ENST00000535375 DLGAP3O95886 979 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 ITGB7P26010 798 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 GNA15P30679 374 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 HNRNPUQ00839 825 aaKnown RBP eCLIP9.08□□□□□ -0.96
PRKDC-205ENST00000535375 PDE3AQ14432 1141 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 PRR23CQ6ZRP0 262 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 SMG8Q8ND04 991 aaKnown RBP9.08□□□□□ -0.96
PRKDC-205ENST00000535375 FAM46AQ96IP4 442 aaKnown RBP9.08□□□□□ -0.96
PRKDC-205ENST00000535375 DUSP9Q99956 384 aaKnown RBP9.08□□□□□ -0.96
PRKDC-205ENST00000535375 TRIM56Q9BRZ2 755 aaKnown RBP9.08□□□□□ -0.96
PRKDC-205ENST00000535375 CEP44Q9C0F1 390 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 SUGCTQ9HAC7 445 aa9.08□□□□□ -0.96
PRKDC-205ENST00000535375 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
PRKDC-205ENST00000535375 NPAS4Q8IUM7 802 aa9.07□□□□□ -0.96
PRKDC-205ENST00000535375 NRSN2Q9GZP1 204 aa9.07□□□□□ -0.96
PRKDC-205ENST00000535375 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
PRKDC-205ENST00000535375 RAXQ9Y2V3 346 aa9.07□□□□□ -0.96
PRKDC-205ENST00000535375 PREPP48147 710 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 USP11P51784 963 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 XPCQ01831 940 aaPredicted RBP9.06□□□□□ -0.96
PRKDC-205ENST00000535375 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 TPTE2Q6XPS3 522 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 C3orf58Q8NDZ4 430 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 MYRFLQ96LU7 910 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 PPM1HQ9ULR3 514 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 SAMM50Q9Y512 469 aa9.06□□□□□ -0.96
PRKDC-205ENST00000535375 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
PRKDC-205ENST00000535375 BMP3P12645 472 aa9.05□□□□□ -0.96
PRKDC-205ENST00000535375 ZMYM1Q5SVZ6 1142 aa9.05□□□□□ -0.96
PRKDC-205ENST00000535375 ARMC10Q8N2F6 343 aa9.05□□□□□ -0.96
PRKDC-205ENST00000535375 EMILIN2Q9BXX0 1053 aa9.05□□□□□ -0.96
PRKDC-205ENST00000535375 ECEL1O95672 775 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 DRD2P14416 443 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 RXRBP28702 533 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
PRKDC-205ENST00000535375 PSMD2Q13200 908 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 AKAP4Q5JQC9 854 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 PRSS36Q5K4E3 855 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
PRKDC-205ENST00000535375 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 Q8N3U1 123 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 ZC3H12CQ9C0D7 883 aaKnown RBP9.04□□□□□ -0.96
PRKDC-205ENST00000535375 HIF3AQ9Y2N7 669 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 AK5Q9Y6K8 562 aa9.04□□□□□ -0.96
PRKDC-205ENST00000535375 TIAF1O95411 115 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 CTSBP07858 339 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 GSTP1P09211 210 aaKnown RBP9.03□□□□□ -0.96
PRKDC-205ENST00000535375 XP32Q5T750 250 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 FAM20CQ8IXL6 584 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 KCNB2Q92953 911 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 YIPF2Q9BWQ6 316 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 PARP2Q9UGN5 583 aa9.03□□□□□ -0.96
PRKDC-205ENST00000535375 TTF2Q9UNY4 1162 aaKnown RBP9.03□□□□□ -0.96
PRKDC-205ENST00000535375 FBXO24O75426 580 aa9.02□□□□□ -0.97
PRKDC-205ENST00000535375 SLFN14P0C7P3 912 aa9.02□□□□□ -0.97
PRKDC-205ENST00000535375 NME2P22392 152 aa9.02□□□□□ -0.97
PRKDC-205ENST00000535375 ARNTP27540 789 aa9.02□□□□□ -0.97
PRKDC-205ENST00000535375 CLEC10AQ8IUN9 316 aa9.02□□□□□ -0.97
PRKDC-205ENST00000535375 NECAB3Q96P71 396 aaPredicted RBP9.02□□□□□ -0.97
PRKDC-205ENST00000535375 AP4E1Q9UPM8 1137 aa9.02□□□□□ -0.97
PRKDC-205ENST00000535375 AOC2O75106 756 aa9.01□□□□□ -0.97
PRKDC-205ENST00000535375 ADH5P11766 374 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms