RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
SPG11-203ENST00000535302 ARMT1Q9H993 441 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 GUCA1BQ9UMX6 200 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 LDHBP07195 334 aaKnown RBP14.26□□□□□ -0.13
SPG11-203ENST00000535302 LRRC27Q9C0I9 530 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 VPS18Q9P253 973 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■□□□□ 9.9
SPG11-203ENST00000535302 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 RAPGEF1Q13905 1077 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 TAF5LO75529 589 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 EP400NLQ6ZTU2 488 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 CUL7Q14999 1698 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 NEMFO60524 1076 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 SEC24BO95487 1268 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 TPTE2Q6XPS3 522 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 OTUD7AQ8TE49 926 aaPredicted RBP14.26□□□□□ -0.13
SPG11-203ENST00000535302 ASXL1Q8IXJ9 1541 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 WDR7Q9Y4E6 1490 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 UBLCP1Q8WVY7 318 aaPredicted RBP14.25□□□□□ -0.13
SPG11-203ENST00000535302 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
SPG11-203ENST00000535302 SORBS3O60504 671 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 PRIM1P49642 420 aaKnown RBP14.25□□□□□ -0.13
SPG11-203ENST00000535302 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
SPG11-203ENST00000535302 CRCPO75575 148 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 SATB1Q01826 763 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 SELENOOQ9BVL4 669 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 TRIM75PA6NK02 468 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 B4E1Z4 1266 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
SPG11-203ENST00000535302 HMGB2P26583 209 aaKnown RBP14.25□□□□□ -0.13
SPG11-203ENST00000535302 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
SPG11-203ENST00000535302 TXNDC16Q9P2K2 825 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 PPP1R12AO14974 1030 aaPredicted RBP14.24□□□□□ -0.13
SPG11-203ENST00000535302 RNMTO43148 476 aaKnown RBP14.24□□□□□ -0.13
SPG11-203ENST00000535302 TOM1O60784 492 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 PPP1R7Q15435 360 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 PYM1Q9BRP8 204 aaKnown RBP14.24□□□□□ -0.13
SPG11-203ENST00000535302 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 CFAP157Q5JU67 520 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 A0A1B0GVL5 298 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 DDX39AO00148 427 aaKnown RBP14.24□□□□□ -0.13
SPG11-203ENST00000535302 PRDM1O75626 825 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 HOXC9P31274 260 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 CCT6AP40227 531 aaKnown RBP14.24□□□□□ -0.13
SPG11-203ENST00000535302 GABPAQ06546 454 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 TMTC2Q8N394 836 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 MAP3K5Q99683 1374 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 PSMA7O14818 248 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 BACH1O14867 736 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 C8orf34Q49A92 452 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 FCHSD1Q86WN1 690 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 RNF34Q969K3 372 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 ANAPC4Q9UJX5 808 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 FAM169AQ9Y6X4 670 aa14.24□□□□□ -0.13
SPG11-203ENST00000535302 LRRC43Q8N309 656 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
SPG11-203ENST00000535302 CTNND2Q9UQB3 1225 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 SNX16P57768 344 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 KRT79Q5XKE5 535 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 RUFY3Q7L099 469 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 UFL1O94874 794 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 CYLC1P35663 651 aaPredicted RBP14.23□□□□□ -0.13
SPG11-203ENST00000535302 VAMP4O75379 141 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 ARHGAP45Q92619 1136 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 MYL10Q9BUA6 226 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 GCP02774 474 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 ITGA6P23229 1130 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 NCOA5Q9HCD5 579 aaKnown RBP14.23□□□□□ -0.13
SPG11-203ENST00000535302 IFNKQ9P0W0 207 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 AGTPBP1Q9UPW5 1226 aa14.23□□□□□ -0.13
SPG11-203ENST00000535302 TYRO3Q06418 890 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 JDP2Q8WYK2 163 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 SMC6Q96SB8 1091 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CLGNO14967 610 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CTDSPL2Q05D32 466 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 PLCH2O75038 1416 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CTAGE15A4D2H0 777 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CTAGE8P0CG41 777 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CTAGE6Q86UF2 777 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CTAGE4Q8IX94 777 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 CTAGE1Q96RT6 745 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 NOLC1Q14978 699 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPG11-203ENST00000535302 OTUD7BQ6GQQ9 843 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 IFI16Q16666 785 aaKnown RBP14.22□□□□□ -0.13
SPG11-203ENST00000535302 LONRF3Q496Y0 759 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 ZNF569Q5MCW4 686 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 RASAL2Q9UJF2 1139 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 SYCP2Q9BX26 1530 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 POTEB2H3BUK9 544 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 HPDP32754 393 aaPredicted RBP14.22□□□□□ -0.13
SPG11-203ENST00000535302 CCDC171Q6TFL3 1326 aa14.22□□□□□ -0.13
SPG11-203ENST00000535302 ABCC1P33527 1531 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms