RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 NBPF7P0C2Y1 421 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-201ENST00000535076 MAPTP10636 758 aaKnown RBP6.13□□□□□ -1.43
SNHG1-201ENST00000535076 RASA1P20936 1047 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 IRS1P35568 1242 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 PRPHP41219 470 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 ATP1A2P50993 1020 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 NCAPG2Q86XI2 1143 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 TXLNBQ8N3L3 684 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 PDLIM2Q96JY6 352 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 RMI1Q9H9A7 625 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 A1CFQ9NQ94 594 aaKnown RBP6.13□□□□□ -1.43
SNHG1-201ENST00000535076 FAM53CQ9NYF3 392 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 TRAK1Q9UPV9 953 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 NPC1L1Q9UHC9 1359 aa6.13□□□□□ -1.43
SNHG1-201ENST00000535076 RBM47A0AV96 593 aaKnown RBP6.12□□□□□ -1.43
SNHG1-201ENST00000535076 SERTM1A2A2V5 107 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 M0R2N6 131 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 EFSO43281 561 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 CAND2O75155 1236 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 TPPPO94811 219 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 CPP00450 1065 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 CCDC175P0C221 793 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 BMP4P12644 408 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 TATP17735 454 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-201ENST00000535076 LMOD1P29536 600 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-201ENST00000535076 MAP2K3P46734 347 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 RBM5P52756 815 aaKnown RBP eCLIP6.12□□□□□ -1.43
SNHG1-201ENST00000535076 SNRPNP63162 240 aaKnown RBP6.12□□□□□ -1.43
SNHG1-201ENST00000535076 MAP3K10Q02779 954 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 DPYDQ12882 1025 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.436e-9■■□□□ 14.5
SNHG1-201ENST00000535076 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 LRRC69Q6ZNQ3 347 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 RPUSD2Q8IZ73 545 aaKnown RBP6.12□□□□□ -1.43
SNHG1-201ENST00000535076 KRT222Q8N1A0 295 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 CCDC191Q8NCU4 936 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 IGSF5Q9NSI5 407 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 PNMA2Q9UL42 364 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 BLOC1S6Q9UL45 172 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 PHF24Q9UPV7 400 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 HCN4Q9Y3Q4 1203 aa6.12□□□□□ -1.43
SNHG1-201ENST00000535076 CGNL1Q0VF96 1302 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L15C9J2P7 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L10C9JJH3 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L13C9JLJ4 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L12C9JPN9 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L11C9JVI0 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L21D6R901 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L18D6R9N7 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L22D6RA61 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L17D6RBQ6 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L19D6RCP7 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L20D6RJB6 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 KHNYNO15037 678 aaKnown RBP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 CTIFO43310 598 aaKnown RBP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 FAM157BP0CG42 384 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 VCAM1P19320 739 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 MCM4P33991 863 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP8P40818 1118 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 MAGEA9P43362 315 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 HIRAP54198 1017 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 MARSP56192 900 aaKnown RBP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 SESN3P58005 492 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 USP17L24Q0WX57 530 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 DCTN1Q14203 1278 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 RBBP5Q15291 538 aaKnown RBP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 LEKR1Q6ZMV7 388 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 MYOCDQ8IZQ8 938 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 ZNF280CQ8ND82 737 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 HSH2DQ96JZ2 352 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 DIAPH3Q9NSV4 1193 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 GNL3LQ9NVN8 582 aaKnown RBP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 IRAK4Q9NWZ3 460 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 SWAP70Q9UH65 585 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 GGA1Q9UJY5 639 aa6.11□□□□□ -1.43
SNHG1-201ENST00000535076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
SNHG1-201ENST00000535076 MYO1CO00159 1063 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 ITGB2P05107 769 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 TPM1P09493 284 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 MYBL2P10244 700 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 KCNA2P16389 499 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 BDNFP23560 247 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 HNRNPH2P55795 449 aaKnown RBP6.1□□□□□ -1.43
SNHG1-201ENST00000535076 PSMA6P60900 246 aaKnown RBP6.1□□□□□ -1.43
SNHG1-201ENST00000535076 NUCB2P80303 420 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
SNHG1-201ENST00000535076 TTC31Q49AM3 519 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-201ENST00000535076 C16orf87Q6PH81 154 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 BICDL1Q6ZP65 573 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 MMS22LQ6ZRQ5 1243 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 TAX1BP1Q86VP1 789 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 FCHSD1Q86WN1 690 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 IQUBQ8NA54 791 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 TCP11Q8WWU5 503 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 TRIM7Q9C029 511 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 PHACTR1Q9C0D0 580 aa6.1□□□□□ -1.43
SNHG1-201ENST00000535076 RSPH9Q9H1X1 276 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms