RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 FSTP19883 344 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SCNN1AP37088 669 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ATP11AP98196 1134 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 Q6ZS46 218 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ABTB2Q8N961 1025 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 KRTAP9-2Q9BYQ4 174 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 LACRTQ9GZZ8 138 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 STIM2Q9P246 746 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 RNF17Q9BXT8 1623 aaKnown RBP8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PLCH2O75038 1416 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 PRAG1Q86YV5 1406 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ERBINQ96RT1 1412 aa8.09□□□□□ -1.11
TNFRSF1A-206ENST00000535038 ROCK2O75116 1388 aaKnown RBP8.09□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ZBED9Q6R2W3 1325 aa8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 DEPDC5O75140 1603 aa8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 LINC01387J3KSC0 135 aa8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 HNRNPMP52272 730 aaKnown RBP eCLIP8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ERICH6BQ5W0A0 696 aa8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ABI2Q9NYB9 513 aaPredicted RBP8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 PRDM15P57071 1507 aaPredicted RBP8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ARHGAP5Q13017 1502 aa8.08□□□□□ -1.12
TNFRSF1A-206ENST00000535038 A2MP01023 1474 aa8.07□□□□□ -1.12
TNFRSF1A-206ENST00000535038 TSPY4P0CV99 314 aa8.07□□□□□ -1.12
TNFRSF1A-206ENST00000535038 TSPY10P0CW01 314 aa8.07□□□□□ -1.12
TNFRSF1A-206ENST00000535038 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
TNFRSF1A-206ENST00000535038 VWDEQ8N2E2 1590 aa8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ZBTB39O15060 712 aa8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 KIF4AO95239 1232 aa8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CDC27P30260 824 aa8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CD68P34810 354 aaPredicted RBP8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 HNRNPUQ00839 825 aaKnown RBP eCLIP8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 TXNDC11Q6PKC3 985 aa8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 RASSF4Q9H2L5 321 aa8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 EIF2AK4Q9P2K8 1649 aaKnown RBP8.06□□□□□ -1.12
TNFRSF1A-206ENST00000535038 NEURL4Q96JN8 1562 aa8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 RTEL1-TNFRSF6BF6WH68 1400 aa8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ABCA9Q8IUA7 1624 aa8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CDC25BP30305 580 aa8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 PCMTD2Q9NV79 361 aa8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 RAXQ9Y2V3 346 aa8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 LRPPRCP42704 1394 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 KTN1Q86UP2 1357 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-206ENST00000535038 RNF123Q5XPI4 1314 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 SMG6Q86US8 1419 aaKnown RBP8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ZFYVE16Q7Z3T8 1539 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 GSC2O15499 205 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 WISP1O95388 367 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CYP2E1P05181 493 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ACAD11Q709F0 780 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 NCAPG2Q86XI2 1143 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 PBXIP1Q96AQ6 731 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 UBL7Q96S82 380 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 PBX4Q9BYU1 374 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CEP41Q9BYV8 373 aa8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 INO80Q9ULG1 1556 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-206ENST00000535038 PTPRTO14522 1441 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 IQGAP1P46940 1657 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 FSCN2O14926 492 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 NEFLP07196 543 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 KLHL23Q8NBE8 558 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 KCNK4Q9NYG8 393 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 STOML1Q9UBI4 398 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CEP152O94986 1710 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 MADDQ8WXG6 1647 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 TRPM2O94759 1503 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 ZMYM4Q5VZL5 1548 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 CCDC144AA2RUR9 1427 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 TRAPPC8Q9Y2L5 1435 aa8.03□□□□□ -1.12
TNFRSF1A-206ENST00000535038 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 PTPRAP18433 802 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 SSTR4P31391 388 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 ADAMTSL4Q6UY14 1074 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 ZNF438Q7Z4V0 828 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 CEP120Q8N960 986 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 ELP3Q9H9T3 547 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 SPHKAPQ2M3C7 1700 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 TET3O43151 1660 aa8.02□□□□□ -1.13
TNFRSF1A-206ENST00000535038 WDR7Q9Y4E6 1490 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 INSRP06213 1382 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 MROH1Q8NDA8 1641 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 IGLV1-40P01703 118 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 EPHA1P21709 976 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 UVSSAQ2YD98 709 aa8.01□□□□□ -1.13
TNFRSF1A-206ENST00000535038 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms