RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 GRIK5Q16478 980 aa23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 NBPF12Q5TAG4 269 aaPredicted RBP23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 INTS3Q68E01 1043 aaKnown RBP23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 CFHR5Q9BXR6 569 aa23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 IQSEC3Q9UPP2 1182 aaPredicted RBP23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 AKAP11Q9UKA4 1901 aa23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 SLC5A1P13866 664 aa23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 CHAF1AQ13111 956 aaPredicted RBP23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 NOM1Q5C9Z4 860 aaKnown RBP23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 TDRD3Q9H7E2 651 aaKnown RBP23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 FZD1Q9UP38 647 aa23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 CASP8AP2Q9UKL3 1982 aa23.51■■□□□ 1.35
NDUFS3-213ENST00000534716 CCDC85CA6NKD9 419 aa23.5■■□□□ 1.35
NDUFS3-213ENST00000534716 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
NDUFS3-213ENST00000534716 SLC10A4Q96EP9 437 aa23.5■■□□□ 1.35
NDUFS3-213ENST00000534716 LRRFIP2Q9Y608 721 aaKnown RBP23.5■■□□□ 1.35
NDUFS3-213ENST00000534716 ZBTB22O15209 634 aa23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 USP2O75604 605 aaPredicted RBP23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 INHBEP58166 350 aa23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 TEKT1Q969V4 418 aa23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 ZDHHC15Q96MV8 337 aa23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 TEPSINQ96N21 525 aa23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 MEIS3Q99687 375 aa23.49■■□□□ 1.35
NDUFS3-213ENST00000534716 IL15P40933 162 aaPredicted RBP23.48■■□□□ 1.35
NDUFS3-213ENST00000534716 IREB2P48200 963 aaKnown RBP23.48■■□□□ 1.35
NDUFS3-213ENST00000534716 COPRSQ9NQ92 184 aa23.48■■□□□ 1.35
NDUFS3-213ENST00000534716 CEP126Q9P2H0 1117 aa23.48■■□□□ 1.35
NDUFS3-213ENST00000534716 MAST3O60307 1309 aa23.48■■□□□ 1.35
NDUFS3-213ENST00000534716 MANSC4A6NHS7 340 aaPredicted RBP23.47■■□□□ 1.35
NDUFS3-213ENST00000534716 IPO8O15397 1037 aaKnown RBP23.47■■□□□ 1.35
NDUFS3-213ENST00000534716 GNAI3P08754 354 aa23.47■■□□□ 1.35
NDUFS3-213ENST00000534716 TNNI2P48788 182 aa23.47■■□□□ 1.35
NDUFS3-213ENST00000534716 MKRN3Q13064 507 aaKnown RBP23.47■■□□□ 1.35
NDUFS3-213ENST00000534716 WDR66Q8TBY9 1149 aa23.47■■□□□ 1.35
NDUFS3-213ENST00000534716 RGS19P49795 217 aa23.46■■□□□ 1.35
NDUFS3-213ENST00000534716 FKBP1CQ5VVH2 108 aa23.46■■□□□ 1.35
NDUFS3-213ENST00000534716 ANKRD13AQ8IZ07 590 aa23.46■■□□□ 1.35
NDUFS3-213ENST00000534716 WNK4Q96J92 1243 aa23.46■■□□□ 1.35
NDUFS3-213ENST00000534716 CLMNQ96JQ2 1002 aa23.46■■□□□ 1.35
NDUFS3-213ENST00000534716 SIL1Q9H173 461 aa23.46■■□□□ 1.35
NDUFS3-213ENST00000534716 TBC1D8O95759 1140 aa23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 ALDH1A1P00352 501 aa23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 MTX1Q13505 466 aa23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 APOBEC3HQ6NTF7 200 aaKnown RBP23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 HHIPL2Q6UWX4 724 aa23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 CTU1Q7Z7A3 348 aaKnown RBP23.45■■□□□ 1.34
NDUFS3-213ENST00000534716 TCP10L2B9ZVM9 353 aa23.44■■□□□ 1.34
NDUFS3-213ENST00000534716 ZNF296Q8WUU4 475 aaPredicted RBP23.44■■□□□ 1.34
NDUFS3-213ENST00000534716 TMEM39BQ9GZU3 492 aa23.44■■□□□ 1.34
NDUFS3-213ENST00000534716 SEMA3EO15041 775 aa23.43■■□□□ 1.34
NDUFS3-213ENST00000534716 TRIM27P14373 513 aa23.43■■□□□ 1.34
NDUFS3-213ENST00000534716 ATF7IPQ6VMQ6 1270 aa23.43■■□□□ 1.34
NDUFS3-213ENST00000534716 FAM83AQ86UY5 434 aa23.43■■□□□ 1.34
NDUFS3-213ENST00000534716 GNL3LQ9NVN8 582 aaKnown RBP23.43■■□□□ 1.34
NDUFS3-213ENST00000534716 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
NDUFS3-213ENST00000534716 SALL1Q9NSC2 1324 aa23.42■■□□□ 1.34
NDUFS3-213ENST00000534716 GPR25O00155 361 aa23.42■■□□□ 1.34
NDUFS3-213ENST00000534716 IFNL1Q8IU54 200 aa23.42■■□□□ 1.34
NDUFS3-213ENST00000534716 CDAN1Q8IWY9 1227 aa23.42■■□□□ 1.34
NDUFS3-213ENST00000534716 LAMB1P07942 1786 aa23.42■■□□□ 1.34
NDUFS3-213ENST00000534716 BCAR3O75815 825 aa23.41■■□□□ 1.34
NDUFS3-213ENST00000534716 GJA5P36382 358 aa23.41■■□□□ 1.34
NDUFS3-213ENST00000534716 PKN2Q16513 984 aaKnown RBP23.41■■□□□ 1.34
NDUFS3-213ENST00000534716 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
NDUFS3-213ENST00000534716 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.4■■□□□ 1.34
NDUFS3-213ENST00000534716 DENND2AQ9ULE3 1009 aa23.4■■□□□ 1.34
NDUFS3-213ENST00000534716 SRGAP3O43295 1099 aa23.39■■□□□ 1.33
NDUFS3-213ENST00000534716 MIER1Q8N108 512 aa23.39■■□□□ 1.33
NDUFS3-213ENST00000534716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.39■■□□□ 1.33
NDUFS3-213ENST00000534716 TMOD2Q9NZR1 351 aa23.39■■□□□ 1.33
NDUFS3-213ENST00000534716 RPAP1Q9BWH6 1393 aaPredicted RBP23.39■■□□□ 1.33
NDUFS3-213ENST00000534716 IGF2BP3O00425 579 aaKnown RBP eCLIP23.38■■□□□ 1.33
NDUFS3-213ENST00000534716 PHKA1P46020 1223 aa23.38■■□□□ 1.33
NDUFS3-213ENST00000534716 CACNB3P54284 484 aa23.38■■□□□ 1.33
NDUFS3-213ENST00000534716 MAP3K9P80192 1104 aa23.38■■□□□ 1.33
NDUFS3-213ENST00000534716 HOOK2Q96ED9 719 aa23.38■■□□□ 1.33
NDUFS3-213ENST00000534716 R3HDMLQ9H3Y0 253 aa23.38■■□□□ 1.33
NDUFS3-213ENST00000534716 PDS5AQ29RF7 1337 aaKnown RBP23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 FKTNO75072 461 aa23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 GNAI2P04899 355 aa23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 CCDC102BQ68D86 513 aa23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 FRAT1Q92837 279 aaPredicted RBP23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 OPTNQ96CV9 577 aa23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 AKAP2Q9Y2D5 859 aa23.37■■□□□ 1.33
NDUFS3-213ENST00000534716 LDHBP07195 334 aaKnown RBP23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 PRDX5P30044 214 aa23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 VGLL4Q14135 290 aa23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 ELP3Q9H9T3 547 aa23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 TNNQ9UQP3 1299 aa23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 DAGLAQ9Y4D2 1042 aa23.36■■□□□ 1.33
NDUFS3-213ENST00000534716 ADORA1P30542 326 aa23.35■■□□□ 1.33
NDUFS3-213ENST00000534716 OTUD7BQ6GQQ9 843 aa23.35■■□□□ 1.33
NDUFS3-213ENST00000534716 ZGPATQ8N5A5 531 aaKnown RBP23.35■■□□□ 1.33
NDUFS3-213ENST00000534716 FAM151AQ8WW52 585 aa23.35■■□□□ 1.33
NDUFS3-213ENST00000534716 MS4A4AQ96JQ5 239 aa23.35■■□□□ 1.33
NDUFS3-213ENST00000534716 PTPN18Q99952 460 aa23.35■■□□□ 1.33
NDUFS3-213ENST00000534716 OTOFQ9HC10 1997 aa23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 TIMM10P62072 90 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms