RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 CD99L2Q8TCZ2 262 aa17.51■□□□□ 0.39
CCDC84-208ENST00000534656 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
CCDC84-208ENST00000534656 PTPN22Q9Y2R2 807 aa17.51■□□□□ 0.39
CCDC84-208ENST00000534656 TNNI2P48788 182 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 GRIK5Q16478 980 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
CCDC84-208ENST00000534656 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.5■□□□□ 0.39
CCDC84-208ENST00000534656 VPS37DQ86XT2 251 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 CDAN1Q8IWY9 1227 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 MS4A4AQ96JQ5 239 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 TMEM39BQ9GZU3 492 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 PDE4DIPQ5VU43 2346 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
CCDC84-208ENST00000534656 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
CCDC84-208ENST00000534656 SP3Q02447 781 aa17.49■□□□□ 0.39
CCDC84-208ENST00000534656 LRRC24Q50LG9 513 aa17.49■□□□□ 0.39
CCDC84-208ENST00000534656 CAVIN4Q5BKX8 364 aa17.49■□□□□ 0.39
CCDC84-208ENST00000534656 EFCC1Q9HA90 598 aa17.49■□□□□ 0.39
CCDC84-208ENST00000534656 IQSEC3Q9UPP2 1182 aaPredicted RBP17.49■□□□□ 0.39
CCDC84-208ENST00000534656 OTOFQ9HC10 1997 aa17.48■□□□□ 0.39
CCDC84-208ENST00000534656 FRAT2O75474 233 aaPredicted RBP17.48■□□□□ 0.39
CCDC84-208ENST00000534656 PDE8BO95263 885 aa17.48■□□□□ 0.39
CCDC84-208ENST00000534656 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
CCDC84-208ENST00000534656 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
CCDC84-208ENST00000534656 METTL24Q5JXM2 366 aa17.48■□□□□ 0.39
CCDC84-208ENST00000534656 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
CCDC84-208ENST00000534656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC84-208ENST00000534656 TBC1D22AQ8WUA7 517 aa17.48■□□□□ 0.39
CCDC84-208ENST00000534656 POTEFA5A3E0 1075 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 GTF2A2P52657 109 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 VGLL4Q14135 290 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
CCDC84-208ENST00000534656 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 BRI3BPQ8WY22 251 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
CCDC84-208ENST00000534656 CAP1Q01518 475 aa17.46■□□□□ 0.39
CCDC84-208ENST00000534656 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
CCDC84-208ENST00000534656 CSADQ9Y600 493 aa17.46■□□□□ 0.39
CCDC84-208ENST00000534656 HTTP42858 3142 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 CCL15-CCL14A0A0B4J2E2 113 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
CCDC84-208ENST00000534656 BCAMP50895 628 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 CACNB3P54284 484 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 TAF1CQ15572 869 aaPredicted RBP17.45■□□□□ 0.38
CCDC84-208ENST00000534656 CCL15Q16663 113 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 ARMC5Q96C12 935 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 ZFYVE28Q9HCC9 887 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 PTPRCP08575 1304 aa17.45■□□□□ 0.38
CCDC84-208ENST00000534656 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
CCDC84-208ENST00000534656 OTUD5Q96G74 571 aa17.44■□□□□ 0.38
CCDC84-208ENST00000534656 SUGT1Q9Y2Z0 365 aa17.44■□□□□ 0.38
CCDC84-208ENST00000534656 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
CCDC84-208ENST00000534656 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 IFIT1P09914 478 aaKnown RBP17.43■□□□□ 0.38
CCDC84-208ENST00000534656 FGFR2P21802 821 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 FKBP1CQ5VVH2 108 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
CCDC84-208ENST00000534656 FAM83AQ86UY5 434 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 TMOD2Q9NZR1 351 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 SNCAIPQ9Y6H5 919 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 MAST3O60307 1309 aa17.43■□□□□ 0.38
CCDC84-208ENST00000534656 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
CCDC84-208ENST00000534656 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
CCDC84-208ENST00000534656 ERO1BQ86YB8 467 aa17.42■□□□□ 0.38
CCDC84-208ENST00000534656 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
CCDC84-208ENST00000534656 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
CCDC84-208ENST00000534656 CETPP11597 493 aa17.41■□□□□ 0.38
CCDC84-208ENST00000534656 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
CCDC84-208ENST00000534656 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
CCDC84-208ENST00000534656 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
CCDC84-208ENST00000534656 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
CCDC84-208ENST00000534656 WDHD1O75717 1129 aaPredicted RBP17.4■□□□□ 0.38
CCDC84-208ENST00000534656 EN2P19622 333 aaPredicted RBP17.4■□□□□ 0.38
CCDC84-208ENST00000534656 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
CCDC84-208ENST00000534656 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
CCDC84-208ENST00000534656 ZCCHC17Q9NP64 241 aaKnown RBP17.4■□□□□ 0.38
CCDC84-208ENST00000534656 E9PSI1 815 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 EYA2O00167 538 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 IRF6O14896 467 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 TLR2O60603 784 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
CCDC84-208ENST00000534656 SNAPC2Q13487 334 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 DCAF15Q66K64 600 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 WDR66Q8TBY9 1149 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 LPIN2Q92539 896 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 TMEM106CQ9BVX2 250 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 PTCH2Q9Y6C5 1203 aa17.39■□□□□ 0.37
CCDC84-208ENST00000534656 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
CCDC84-208ENST00000534656 BTBD19C9JJ37 291 aa17.38■□□□□ 0.37
CCDC84-208ENST00000534656 SLC5A1P13866 664 aa17.38■□□□□ 0.37
CCDC84-208ENST00000534656 PPIL2Q13356 520 aa17.38■□□□□ 0.37
CCDC84-208ENST00000534656 SLC9C1Q4G0N8 1177 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms