RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
BEST1-208ENST00000534553 XDHP47989 1333 aa15.79■□□□□ 0.12
BEST1-208ENST00000534553 SERPINB2P05120 415 aa15.79■□□□□ 0.12
BEST1-208ENST00000534553 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
BEST1-208ENST00000534553 TMC4Q7Z404 712 aa15.79■□□□□ 0.12
BEST1-208ENST00000534553 SMARCC2Q8TAQ2 1214 aa15.79■□□□□ 0.12
BEST1-208ENST00000534553 RBM17Q96I25 401 aaKnown RBP15.79■□□□□ 0.12
BEST1-208ENST00000534553 MTA3Q9BTC8 594 aa15.79■□□□□ 0.12
BEST1-208ENST00000534553 FSD2A1L4K1 749 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 PRC1O43663 620 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 HAND2P61296 217 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 STK3Q13188 491 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 RGS22Q8NE09 1264 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 TMEM87BQ96K49 555 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 GZF1Q9H116 711 aaPredicted RBP15.78■□□□□ 0.12
BEST1-208ENST00000534553 RAI14Q9P0K7 980 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 ABCF2Q9UG63 623 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 TIAM2Q8IVF5 1701 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 BBOX1O75936 387 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 CYP7A1P22680 504 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 SCRN1Q12765 414 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 FOXD4L5Q5VV16 416 aaPredicted RBP15.78■□□□□ 0.12
BEST1-208ENST00000534553 SPTY2D1Q68D10 685 aaPredicted RBP15.78■□□□□ 0.12
BEST1-208ENST00000534553 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 FOXD4L4Q8WXT5 416 aaPredicted RBP15.78■□□□□ 0.12
BEST1-208ENST00000534553 SYAP1Q96A49 352 aaPredicted RBP15.78■□□□□ 0.12
BEST1-208ENST00000534553 KRT23Q9C075 422 aa15.78■□□□□ 0.12
BEST1-208ENST00000534553 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
BEST1-208ENST00000534553 VPS37CA5D8V6 355 aaPredicted RBP15.77■□□□□ 0.11
BEST1-208ENST00000534553 PDIA3P30101 505 aaKnown RBP15.77■□□□□ 0.11
BEST1-208ENST00000534553 APOBRQ0VD83 1088 aa15.77■□□□□ 0.11
BEST1-208ENST00000534553 GIMAP6Q6P9H5 292 aa15.77■□□□□ 0.11
BEST1-208ENST00000534553 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.11
BEST1-208ENST00000534553 ARMT1Q9H993 441 aa15.77■□□□□ 0.11
BEST1-208ENST00000534553 SLC4A4Q9Y6R1 1079 aa15.77■□□□□ 0.11
BEST1-208ENST00000534553 COL1A1P02452 1464 aaPredicted RBP15.77■□□□□ 0.11
BEST1-208ENST00000534553 SALL1Q9NSC2 1324 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 MYO5AQ9Y4I1 1855 aaKnown RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 DUOX1Q9NRD9 1551 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 MAGEB6P1A0A0J9YX57 407 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 KLRG2A4D1S0 409 aaPredicted RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 GSG1L2A8MUP6 293 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 PCP11498 1178 aaKnown RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 RXRBP28702 533 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 TDO2P48775 406 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 ZSCAN16Q9H4T2 348 aaPredicted RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
BEST1-208ENST00000534553 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
BEST1-208ENST00000534553 A0A0G2JLW4 131 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 MRE11P49959 708 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 STAG1Q8WVM7 1258 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 EPB41L4AQ9HCS5 686 aaPredicted RBP15.75■□□□□ 0.11
BEST1-208ENST00000534553 RGPD3A6NKT7 1758 aaPredicted RBP15.75■□□□□ 0.11
BEST1-208ENST00000534553 RGPD4Q7Z3J3 1758 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 IRS2Q9Y4H2 1338 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 TAF1P21675 1872 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
BEST1-208ENST00000534553 ATP2B4P23634 1241 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 NT5C2P49902 561 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 AKNAD1Q5T1N1 836 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 ZNF804AQ7Z570 1209 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 TBC1D10CQ8IV04 446 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 PROM2Q8N271 834 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 LCORLQ8N3X6 602 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 NSUN7Q8NE18 718 aaKnown RBP15.75■□□□□ 0.11
BEST1-208ENST00000534553 WDR66Q8TBY9 1149 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
BEST1-208ENST00000534553 MAST2Q6P0Q8 1798 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 ZNF445P59923 1031 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 KRT85P78386 507 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 NBPF3Q9H094 633 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
BEST1-208ENST00000534553 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
BEST1-208ENST00000534553 CACNA1SQ13698 1873 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 PTPDC1A2A3K4 754 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 H3BQV1 296 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 APBA3O96018 575 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 LIFRP42702 1097 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 ANTXR2P58335 489 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 UBE2HP62256 183 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
BEST1-208ENST00000534553 IFFO2Q5TF58 517 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 MFSD6Q6ZSS7 791 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 CERS3Q8IU89 383 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 NSUN4Q96CB9 384 aaKnown RBP15.73■□□□□ 0.11
BEST1-208ENST00000534553 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
BEST1-208ENST00000534553 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 KLF18A0A0U1RQI7 1052 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 CDKL5O76039 1030 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 CAVIN1Q6NZI2 390 aaKnown RBP15.73■□□□□ 0.11
BEST1-208ENST00000534553 CPLX2Q6PUV4 134 aaKnown RBP15.73■□□□□ 0.11
BEST1-208ENST00000534553 USP48Q86UV5 1035 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms