RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 AVPP01185 164 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 RHOQP17081 205 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 USP5P45974 858 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 MAP2K1Q02750 393 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 ENOX2Q16206 610 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 ZIC5Q96T25 663 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 GPC6Q9Y625 555 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 OVOS2A0A0G2JMS6 1433 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 OVOS2A0A0J9YW53 1432 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 OVOS2Q6IE36 1432 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 IGSF1Q8N6C5 1336 aa6.99□□□□□ -1.29
ECHDC1-223ENST00000534442 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 UNC79Q9P2D8 2635 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 PHRF1Q9P1Y6 1649 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 PLEKHG2Q9H7P9 1386 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 MKI67P46013 3256 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 A6NHS1 94 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 TATP17735 454 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 MSX1P28360 303 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 LDLRAD1Q5T700 205 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 IER5Q5VY09 327 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 TRIM46Q7Z4K8 759 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 USP35Q9P2H5 1018 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 PARP2Q9UGN5 583 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 CD2APQ9Y5K6 639 aa6.98□□□□□ -1.29
ECHDC1-223ENST00000534442 TRIOBPQ9H2D6 2365 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 LRPPRCP42704 1394 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 KIF15Q9NS87 1388 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 FAM187AA6NFU0 413 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 TTLL8A6PVC2 850 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 C11orf95C9JLR9 678 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 BMP1P13497 986 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 TCF3P15923 654 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 INPP5BP32019 993 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 IDH3AP50213 366 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 HIF1AQ16665 826 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 FAM161BQ96MY7 647 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 USP20Q9Y2K6 914 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 MYO5BQ9ULV0 1848 aa6.97□□□□□ -1.29
ECHDC1-223ENST00000534442 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 PCSK2P16519 638 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 GRNP28799 593 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 ORC1Q13415 861 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 C8orf34Q49A92 452 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 BICDL1Q6ZP65 573 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 PIK3R5Q8WYR1 880 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 CSRNP1Q96S65 589 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 BACH2Q9BYV9 841 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 FAM13BQ9NYF5 915 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 MBD5Q9P267 1494 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 PKD1L3Q7Z443 1732 aa6.96□□□□□ -1.3
ECHDC1-223ENST00000534442 TNS3Q68CZ2 1445 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 A0A1B0GTH6 734 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 IGSF3O75054 1194 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 DAB2P98082 770 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 SCARF1Q14162 830 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 LRRC69Q6ZNQ3 347 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 TMC4Q7Z404 712 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 BTLAQ7Z6A9 289 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 ANKIB1Q9P2G1 1089 aa6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 CFDP1Q9UEE9 299 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-223ENST00000534442 NRXN3Q9Y4C0 1643 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 CACNA1GO43497 2377 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 FMN2Q9NZ56 1722 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 A0A1W2PNR3 127 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 RGS20O76081 388 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 ARSDP51689 593 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 TRIP4Q15650 581 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 ARSJQ5FYB0 599 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 C9orf131Q5VYM1 1079 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 KCNMB2Q9Y691 235 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
ECHDC1-223ENST00000534442 CCDC144AA2RUR9 1427 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 RPLP1P05386 114 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 FGD1P98174 961 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 NEUROD4Q9HD90 331 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 STRN4Q9NRL3 753 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 ZNF644Q9H582 1327 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 EIF2AK4Q9P2K8 1649 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 CASP8AP2Q9UKL3 1982 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 LTBP1Q14766 1721 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 QSER1Q2KHR3 1735 aa6.93□□□□□ -1.3
ECHDC1-223ENST00000534442 TYRO3Q06418 890 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms