RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 SULF1Q8IWU6 871 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 TDRD3Q9H7E2 651 aaKnown RBP16.47■□□□□ 0.23
CMTM1-219ENST00000533953 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
CMTM1-219ENST00000533953 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
CMTM1-219ENST00000533953 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
CMTM1-219ENST00000533953 SPATA5Q8NB90 893 aa16.46■□□□□ 0.23
CMTM1-219ENST00000533953 CDCA5Q96FF9 252 aa16.46■□□□□ 0.23
CMTM1-219ENST00000533953 NDUFB9Q9Y6M9 179 aa16.46■□□□□ 0.23
CMTM1-219ENST00000533953 SEMA3EO15041 775 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 ARID4AP29374 1257 aaPredicted RBP16.45■□□□□ 0.22
CMTM1-219ENST00000533953 CACNB3P54284 484 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 VEZTQ9HBM0 779 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 SERPINA10Q9UK55 444 aa16.45■□□□□ 0.22
CMTM1-219ENST00000533953 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
CMTM1-219ENST00000533953 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
CMTM1-219ENST00000533953 LDHBP07195 334 aaKnown RBP16.44■□□□□ 0.22
CMTM1-219ENST00000533953 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
CMTM1-219ENST00000533953 MOB2Q70IA6 237 aa16.44■□□□□ 0.22
CMTM1-219ENST00000533953 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
CMTM1-219ENST00000533953 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
CMTM1-219ENST00000533953 ZAP70P43403 619 aa16.43■□□□□ 0.22
CMTM1-219ENST00000533953 MMP14P50281 582 aa16.43■□□□□ 0.22
CMTM1-219ENST00000533953 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
CMTM1-219ENST00000533953 TEKT1Q969V4 418 aa16.43■□□□□ 0.22
CMTM1-219ENST00000533953 DCTPP1Q9H773 170 aa16.43■□□□□ 0.22
CMTM1-219ENST00000533953 FZD1Q9UP38 647 aa16.43■□□□□ 0.22
CMTM1-219ENST00000533953 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 PRKG1Q13976 671 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 CDAN1Q8IWY9 1227 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
CMTM1-219ENST00000533953 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 DAGLAQ9Y4D2 1042 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 PITPNM2Q9BZ72 1349 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
CMTM1-219ENST00000533953 CYP2E1P05181 493 aaPredicted RBP16.41■□□□□ 0.22
CMTM1-219ENST00000533953 IFIT2P09913 472 aaKnown RBP16.41■□□□□ 0.22
CMTM1-219ENST00000533953 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
CMTM1-219ENST00000533953 MECOMQ03112 1051 aa16.41■□□□□ 0.22
CMTM1-219ENST00000533953 GRM1Q13255 1194 aa16.41■□□□□ 0.22
CMTM1-219ENST00000533953 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
CMTM1-219ENST00000533953 ZDHHC15Q96MV8 337 aa16.41■□□□□ 0.22
CMTM1-219ENST00000533953 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
CMTM1-219ENST00000533953 PIH1D3Q9NQM4 214 aaKnown RBP16.41■□□□□ 0.22
CMTM1-219ENST00000533953 RAI14Q9P0K7 980 aa16.41■□□□□ 0.22
CMTM1-219ENST00000533953 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
CMTM1-219ENST00000533953 MYO1BO43795 1136 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 RASA3Q14644 834 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 HHIPL2Q6UWX4 724 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
CMTM1-219ENST00000533953 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
CMTM1-219ENST00000533953 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 MRIQ9BWK5 157 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
CMTM1-219ENST00000533953 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 ZBTB22O15209 634 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 VEGFBP49765 207 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 DEFB115Q30KQ5 88 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 CYP4F22Q6NT55 531 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 CDC42EP5Q6NZY7 148 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 PAXIP1Q6ZW49 1069 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 SAPCD2Q86UD0 394 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 LRP2BPQ9P2M1 347 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 MAST3O60307 1309 aa16.39■□□□□ 0.21
CMTM1-219ENST00000533953 PDS5AQ29RF7 1337 aaKnown RBP16.39■□□□□ 0.21
CMTM1-219ENST00000533953 UBE2Q2LH0YL09 131 aa16.38■□□□□ 0.21
CMTM1-219ENST00000533953 IGHDP01880 384 aa16.38■□□□□ 0.21
CMTM1-219ENST00000533953 TSHZ3Q63HK5 1081 aa16.38■□□□□ 0.21
CMTM1-219ENST00000533953 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
CMTM1-219ENST00000533953 ZGPATQ8N5A5 531 aaKnown RBP16.38■□□□□ 0.21
CMTM1-219ENST00000533953 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
CMTM1-219ENST00000533953 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
CMTM1-219ENST00000533953 HUNKP57058 714 aa16.37■□□□□ 0.21
CMTM1-219ENST00000533953 NFIAQ12857 509 aa16.37■□□□□ 0.21
CMTM1-219ENST00000533953 C2orf69Q8N8R5 385 aa16.37■□□□□ 0.21
CMTM1-219ENST00000533953 OTUD7AQ8TE49 926 aaPredicted RBP16.37■□□□□ 0.21
CMTM1-219ENST00000533953 NSUN4Q96CB9 384 aaKnown RBP16.37■□□□□ 0.21
CMTM1-219ENST00000533953 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
CMTM1-219ENST00000533953 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
CMTM1-219ENST00000533953 CEP350Q5VT06 3117 aa16.36■□□□□ 0.21
CMTM1-219ENST00000533953 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
CMTM1-219ENST00000533953 BTDP43251 543 aa16.36■□□□□ 0.21
CMTM1-219ENST00000533953 TCP10Q12799 353 aa16.36■□□□□ 0.21
CMTM1-219ENST00000533953 TTLL12Q14166 644 aaPredicted RBP16.36■□□□□ 0.21
CMTM1-219ENST00000533953 ZFPM1Q8IX07 1006 aa16.36■□□□□ 0.21
CMTM1-219ENST00000533953 DNAJC2Q99543 621 aaKnown RBP16.36■□□□□ 0.21
CMTM1-219ENST00000533953 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
CMTM1-219ENST00000533953 ADGRA1Q86SQ6 560 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms