RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 USP44Q9H0E7 712 aa12.97□□□□□ -0.33
CLP1-206ENST00000533905 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.97□□□□□ -0.33
CLP1-206ENST00000533905 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 FGFR2P21802 821 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 HIBADHP31937 336 aaKnown RBP12.96□□□□□ -0.33
CLP1-206ENST00000533905 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
CLP1-206ENST00000533905 CRHR2Q13324 411 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 UBE4AQ14139 1066 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 CD99L2Q8TCZ2 262 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 CFHR5Q9BXR6 569 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
CLP1-206ENST00000533905 FKTNO75072 461 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 NF2P35240 595 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 VGLL4Q14135 290 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 OTOP1Q7RTM1 612 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 OPTNQ96CV9 577 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 SLC10A4Q96EP9 437 aa12.95□□□□□ -0.34
CLP1-206ENST00000533905 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
CLP1-206ENST00000533905 SREBF2Q12772 1141 aa12.94□□□□□ -0.34
CLP1-206ENST00000533905 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
CLP1-206ENST00000533905 ATG9AQ7Z3C6 839 aa12.94□□□□□ -0.34
CLP1-206ENST00000533905 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
CLP1-206ENST00000533905 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
CLP1-206ENST00000533905 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
CLP1-206ENST00000533905 APOBEC3HQ6NTF7 200 aaKnown RBP12.93□□□□□ -0.34
CLP1-206ENST00000533905 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
CLP1-206ENST00000533905 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLP1-206ENST00000533905 ARHGAP39Q9C0H5 1083 aa12.93□□□□□ -0.34
CLP1-206ENST00000533905 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
CLP1-206ENST00000533905 PA2G4Q9UQ80 394 aaKnown RBP12.93□□□□□ -0.34
CLP1-206ENST00000533905 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
CLP1-206ENST00000533905 PPP2R3BQ9Y5P8 575 aa12.93□□□□□ -0.34
CLP1-206ENST00000533905 SNCAIPQ9Y6H5 919 aa12.93□□□□□ -0.34
CLP1-206ENST00000533905 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
CLP1-206ENST00000533905 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
CLP1-206ENST00000533905 PDE8BO95263 885 aa12.92□□□□□ -0.34
CLP1-206ENST00000533905 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
CLP1-206ENST00000533905 ADORA1P30542 326 aa12.92□□□□□ -0.34
CLP1-206ENST00000533905 NFIAQ12857 509 aa12.92□□□□□ -0.34
CLP1-206ENST00000533905 DIXDC1Q155Q3 683 aa12.92□□□□□ -0.34
CLP1-206ENST00000533905 ZFPM1Q8IX07 1006 aa12.92□□□□□ -0.34
CLP1-206ENST00000533905 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
CLP1-206ENST00000533905 ZKSCAN4Q969J2 545 aaPredicted RBP12.92□□□□□ -0.34
CLP1-206ENST00000533905 SIL1Q9H173 461 aa12.92□□□□□ -0.34
CLP1-206ENST00000533905 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
CLP1-206ENST00000533905 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
CLP1-206ENST00000533905 CTGFP29279 349 aa12.91□□□□□ -0.34
CLP1-206ENST00000533905 PRDX5P30044 214 aa12.91□□□□□ -0.34
CLP1-206ENST00000533905 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
CLP1-206ENST00000533905 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
CLP1-206ENST00000533905 PPP1R12BO60237 982 aaPredicted RBP12.9□□□□□ -0.34
CLP1-206ENST00000533905 INPP5BP32019 993 aa12.9□□□□□ -0.34
CLP1-206ENST00000533905 MMP14P50281 582 aa12.9□□□□□ -0.34
CLP1-206ENST00000533905 ANKRD13AQ8IZ07 590 aa12.9□□□□□ -0.34
CLP1-206ENST00000533905 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
CLP1-206ENST00000533905 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
CLP1-206ENST00000533905 MYO1BO43795 1136 aa12.89□□□□□ -0.35
CLP1-206ENST00000533905 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
CLP1-206ENST00000533905 SUPT20HL1Q3ZLR7 823 aa12.89□□□□□ -0.35
CLP1-206ENST00000533905 MIGA2Q7L4E1 593 aa12.89□□□□□ -0.35
CLP1-206ENST00000533905 MEIS3Q99687 375 aa12.89□□□□□ -0.35
CLP1-206ENST00000533905 DAGLAQ9Y4D2 1042 aa12.89□□□□□ -0.35
CLP1-206ENST00000533905 ATRNL1Q5VV63 1379 aa12.89□□□□□ -0.35
CLP1-206ENST00000533905 PTPRCP08575 1304 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 EYA2O00167 538 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
CLP1-206ENST00000533905 EN2P19622 333 aaPredicted RBP12.88□□□□□ -0.35
CLP1-206ENST00000533905 PHKA1P46020 1223 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 MOGSQ13724 837 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 CCL15Q16663 113 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
CLP1-206ENST00000533905 PTPN22Q9Y2R2 807 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 PTCH2Q9Y6C5 1203 aa12.88□□□□□ -0.35
CLP1-206ENST00000533905 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 BTBD19C9JJ37 291 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 E9PSI1 815 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 IRF6O14896 467 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 MYCP01106 439 aaPredicted RBP12.87□□□□□ -0.35
CLP1-206ENST00000533905 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
CLP1-206ENST00000533905 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
CLP1-206ENST00000533905 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 ZNF384Q8TF68 577 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 WRNIP1Q96S55 665 aa12.87□□□□□ -0.35
CLP1-206ENST00000533905 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
CLP1-206ENST00000533905 SPDYE5A6NIY4 337 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 TCP10Q12799 353 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 CDC42EP5Q6NZY7 148 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 PI16Q6UXB8 463 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 CCDC84Q86UT8 332 aaPredicted RBP12.86□□□□□ -0.35
CLP1-206ENST00000533905 VPS37DQ86XT2 251 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 TEKT1Q969V4 418 aa12.86□□□□□ -0.35
CLP1-206ENST00000533905 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
CLP1-206ENST00000533905 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms