RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	DENND2A	Q9ULE3	1009 aa		5.18	□□□□□ -1.58
CTSC-208	ENST00000533897	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	CDHR2	Q9BYE9	1310 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	PSD	A5PKW4	1024 aa	Predicted RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	GOLGA6L6	A8MZA4	724 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	SARS	P49591	514 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	AIMP1	Q12904	312 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	PUS3	Q9BZE2	481 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	RIPOR2	Q9Y4F9	1068 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	MYH8	P13535	1937 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897		A0A087WZG4	1122 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	ZNF18	P17022	549 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	FECH	P22830	423 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	PIP4K2A	P48426	406 aa	Predicted RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	SHC4	Q6S5L8	630 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	REXO1L1P	Q8IX06	675 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	PDCL2	Q8N4E4	241 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	PPP1R13B	Q96KQ4	1090 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	FHOD1	Q9Y613	1164 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	ERVV-2	B6SEH9	535 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	RANBP6	O60518	1105 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	CMA1	P23946	247 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	IGDCC4	Q8TDY8	1250 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	PUS7L	Q9H0K6	701 aa	Known RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	C19orf44	Q9H6X5	657 aa		5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	ZNF646	O15015	1829 aa	Predicted RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897	COL1A1	P02452	1464 aa	Predicted RBP	5.17	□□□□□ -1.58
CTSC-208	ENST00000533897		A0A1B0GUL7	405 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	PPP6R2	O75170	966 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	KIF20A	O95235	890 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	FGA	P02671	866 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	TNNT1	P13805	278 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	FGFR2	P21802	821 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ADORA1	P30542	326 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	TIMM10	P62072	90 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	MYSM1	Q5VVJ2	828 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	RESP18	Q5W5W9	173 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	C16orf45	Q96MC5	204 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	WDR17	Q8IZU2	1322 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	STK36	Q9NRP7	1315 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	CCDC69	A6NI79	296 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ATP5J2-PTCD1	G3V325	749 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	GOLIM4	O00461	696 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	PTCD1	O75127	700 aa	Known RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	CDC27	P30260	824 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	NLRP12	P59046	1061 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	NEXN	Q0ZGT2	675 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	SLC39A14	Q15043	492 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	CEP135	Q66GS9	1140 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	FBXO38	Q6PIJ6	1188 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	CYB5R4	Q7L1T6	521 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	SGMS1	Q86VZ5	419 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	TBC1D10C	Q8IV04	446 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	MRPS27	Q92552	414 aa	Known RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	SENP2	Q9HC62	589 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	GJB4	Q9NTQ9	266 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ZNF215	Q9UL58	517 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	UBN2	Q6ZU65	1347 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	CCDC88A	Q3V6T2	1871 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	SH2B2	O14492	632 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ARID4A	P29374	1257 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	TOB1	P50616	345 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	BRAP	Q7Z569	592 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	METTL16	Q86W50	562 aa	Known RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	DPF2	Q92785	391 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	SOS2	Q07890	1332 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	PHLPP2	Q6ZVD8	1323 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	BCL9	O00512	1426 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	PBX1	P40424	430 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	MCAM	P43121	646 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	GABPB1	Q06547	395 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ALX1	Q15699	326 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	KIFC2	Q96AC6	838 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ZNF594	Q96JF6	807 aa	Predicted RBP	5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	ANO10	Q9NW15	660 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	LTBP1	Q14766	1721 aa		5.16	□□□□□ -1.58
CTSC-208	ENST00000533897	SKIL	P12757	684 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	PFKFB1	P16118	471 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	ADD2	P35612	726 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	STK11IP	Q8N1F8	1099 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	ERCC4	Q92889	916 aa	Predicted RBP	5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	ERO1A	Q96HE7	468 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	TRIM5	Q9C035	493 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	XPO4	Q9C0E2	1151 aa	Known RBP	5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	PRDM10	Q9NQV6	1147 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	SEC31B	Q9NQW1	1179 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	CWC25	Q9NXE8	425 aa	Predicted RBP	5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	CGN	Q9P2M7	1197 aa	Known RBP	5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	KIF13B	Q9NQT8	1826 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	PCDH11X	Q9BZA7	1347 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	PCDH11Y	Q9BZA8	1340 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	TAT	P17735	454 aa	Predicted RBP	5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	CBX1	P83916	185 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	AOPEP	Q8N6M6	819 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	KCNG4	Q8TDN1	519 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	SLC4A9	Q96Q91	983 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	DNAJC2	Q99543	621 aa	Known RBP	5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	LY9	Q9HBG7	655 aa		5.15	□□□□□ -1.58
CTSC-208	ENST00000533897	PARP3	Q9Y6F1	533 aa		5.15	□□□□□ -1.58

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