RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 ARHGAP45Q92619 1136 aa21.78■■□□□ 1.08
VPS51-213ENST00000533827 FBXO3Q9UK99 471 aa21.78■■□□□ 1.08
VPS51-213ENST00000533827 USP2O75604 605 aaPredicted RBP21.77■■□□□ 1.08
VPS51-213ENST00000533827 SREBF2Q12772 1141 aa21.77■■□□□ 1.08
VPS51-213ENST00000533827 LRRFIP2Q9Y608 721 aaKnown RBP21.77■■□□□ 1.08
VPS51-213ENST00000533827 CIAO1O76071 339 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 TBC1D8O95759 1140 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 SLC10A4Q96EP9 437 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 CLMNQ96JQ2 1002 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 TEPSINQ96N21 525 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 MRIQ9BWK5 157 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 HDAC5Q9UQL6 1122 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 LAMB1P07942 1786 aa21.76■■□□□ 1.07
VPS51-213ENST00000533827 SLC5A1P13866 664 aa21.75■■□□□ 1.07
VPS51-213ENST00000533827 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
VPS51-213ENST00000533827 MEIS3Q99687 375 aa21.75■■□□□ 1.07
VPS51-213ENST00000533827 CFHR5Q9BXR6 569 aa21.75■■□□□ 1.07
VPS51-213ENST00000533827 SIL1Q9H173 461 aa21.75■■□□□ 1.07
VPS51-213ENST00000533827 SUGT1Q9Y2Z0 365 aa21.75■■□□□ 1.07
VPS51-213ENST00000533827 TCP10L2B9ZVM9 353 aa21.74■■□□□ 1.07
VPS51-213ENST00000533827 ZBTB48P10074 688 aaPredicted RBP21.74■■□□□ 1.07
VPS51-213ENST00000533827 IREB2P48200 963 aaKnown RBP21.74■■□□□ 1.07
VPS51-213ENST00000533827 TEKT1Q969V4 418 aa21.74■■□□□ 1.07
VPS51-213ENST00000533827 WNK4Q96J92 1243 aa21.74■■□□□ 1.07
VPS51-213ENST00000533827 MYH13Q9UKX3 1938 aa21.73■■□□□ 1.07
VPS51-213ENST00000533827 NOM1Q5C9Z4 860 aaKnown RBP21.73■■□□□ 1.07
VPS51-213ENST00000533827 CDAN1Q8IWY9 1227 aa21.73■■□□□ 1.07
VPS51-213ENST00000533827 ZDHHC15Q96MV8 337 aa21.73■■□□□ 1.07
VPS51-213ENST00000533827 COPRSQ9NQ92 184 aa21.73■■□□□ 1.07
VPS51-213ENST00000533827 MANSC4A6NHS7 340 aaPredicted RBP21.72■■□□□ 1.07
VPS51-213ENST00000533827 TNNI2P48788 182 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 RGS19P49795 217 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 INHBEP58166 350 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 CTU1Q7Z7A3 348 aaKnown RBP21.72■■□□□ 1.07
VPS51-213ENST00000533827 ANKRD13AQ8IZ07 590 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 ZNF296Q8WUU4 475 aaPredicted RBP21.72■■□□□ 1.07
VPS51-213ENST00000533827 TMEM39BQ9GZU3 492 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.72■■□□□ 1.07
VPS51-213ENST00000533827 CEP126Q9P2H0 1117 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 PA2G4Q9UQ80 394 aaKnown RBP21.72■■□□□ 1.07
VPS51-213ENST00000533827 MAST3O60307 1309 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 OTOFQ9HC10 1997 aa21.72■■□□□ 1.07
VPS51-213ENST00000533827 GPR25O00155 361 aa21.71■■□□□ 1.07
VPS51-213ENST00000533827 IL15P40933 162 aaPredicted RBP21.71■■□□□ 1.07
VPS51-213ENST00000533827 ATP2B3Q16720 1220 aa21.71■■□□□ 1.07
VPS51-213ENST00000533827 APOBEC3HQ6NTF7 200 aaKnown RBP21.71■■□□□ 1.07
VPS51-213ENST00000533827 HHIPL2Q6UWX4 724 aa21.71■■□□□ 1.07
VPS51-213ENST00000533827 WDR66Q8TBY9 1149 aa21.71■■□□□ 1.07
VPS51-213ENST00000533827 ALDH1A1P00352 501 aa21.7■■□□□ 1.06
VPS51-213ENST00000533827 GJA5P36382 358 aa21.7■■□□□ 1.06
VPS51-213ENST00000533827 BCAR3O75815 825 aa21.69■■□□□ 1.06
VPS51-213ENST00000533827 GNAI3P08754 354 aa21.69■■□□□ 1.06
VPS51-213ENST00000533827 CACNB3P54284 484 aa21.69■■□□□ 1.06
VPS51-213ENST00000533827 IFNL1Q8IU54 200 aa21.69■■□□□ 1.06
VPS51-213ENST00000533827 R3HDMLQ9H3Y0 253 aa21.69■■□□□ 1.06
VPS51-213ENST00000533827 IPO8O15397 1037 aaKnown RBP21.68■■□□□ 1.06
VPS51-213ENST00000533827 TRIM27P14373 513 aa21.68■■□□□ 1.06
VPS51-213ENST00000533827 MTX1Q13505 466 aa21.68■■□□□ 1.06
VPS51-213ENST00000533827 FKBP1CQ5VVH2 108 aa21.68■■□□□ 1.06
VPS51-213ENST00000533827 TNNQ9UQP3 1299 aa21.68■■□□□ 1.06
VPS51-213ENST00000533827 IGF2BP3O00425 579 aaKnown RBP eCLIP21.67■■□□□ 1.06
VPS51-213ENST00000533827 ZBTB22O15209 634 aa21.67■■□□□ 1.06
VPS51-213ENST00000533827 ATF7IPQ6VMQ6 1270 aa21.67■■□□□ 1.06
VPS51-213ENST00000533827 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
VPS51-213ENST00000533827 FAM83AQ86UY5 434 aa21.67■■□□□ 1.06
VPS51-213ENST00000533827 GNL3LQ9NVN8 582 aaKnown RBP21.67■■□□□ 1.06
VPS51-213ENST00000533827 SALL1Q9NSC2 1324 aa21.66■■□□□ 1.06
VPS51-213ENST00000533827 PHKA1P46020 1223 aa21.66■■□□□ 1.06
VPS51-213ENST00000533827 MIER1Q8N108 512 aa21.66■■□□□ 1.06
VPS51-213ENST00000533827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.66■■□□□ 1.06
VPS51-213ENST00000533827 ELP3Q9H9T3 547 aa21.66■■□□□ 1.06
VPS51-213ENST00000533827 TMOD2Q9NZR1 351 aa21.66■■□□□ 1.06
VPS51-213ENST00000533827 TESPA1A2RU30 521 aaPredicted RBP21.65■■□□□ 1.06
VPS51-213ENST00000533827 SEMA3EO15041 775 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 SRGAP3O43295 1099 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 FKTNO75072 461 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 PRDX5P30044 214 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 MAP3K9P80192 1104 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 PKN2Q16513 984 aaKnown RBP21.65■■□□□ 1.06
VPS51-213ENST00000533827 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
VPS51-213ENST00000533827 OPTNQ96CV9 577 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 DENND2AQ9ULE3 1009 aa21.65■■□□□ 1.06
VPS51-213ENST00000533827 ADORA1P30542 326 aa21.64■■□□□ 1.05
VPS51-213ENST00000533827 MLLT1Q03111 559 aaPredicted RBP21.64■■□□□ 1.05
VPS51-213ENST00000533827 VGLL4Q14135 290 aa21.64■■□□□ 1.05
VPS51-213ENST00000533827 CCDC102BQ68D86 513 aa21.64■■□□□ 1.05
VPS51-213ENST00000533827 PTPN18Q99952 460 aa21.64■■□□□ 1.05
VPS51-213ENST00000533827 DAGLAQ9Y4D2 1042 aa21.64■■□□□ 1.05
VPS51-213ENST00000533827 RPAP1Q9BWH6 1393 aaPredicted RBP21.63■■□□□ 1.05
VPS51-213ENST00000533827 TIMM10P62072 90 aa21.63■■□□□ 1.05
VPS51-213ENST00000533827 DIXDC1Q155Q3 683 aa21.63■■□□□ 1.05
VPS51-213ENST00000533827 MS4A4AQ96JQ5 239 aa21.63■■□□□ 1.05
VPS51-213ENST00000533827 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
VPS51-213ENST00000533827 OTUD7BQ6GQQ9 843 aa21.62■■□□□ 1.05
VPS51-213ENST00000533827 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
VPS51-213ENST00000533827 CLUAP1Q96AJ1 413 aa21.62■■□□□ 1.05
VPS51-213ENST00000533827 HPS5Q9UPZ3 1129 aa21.62■■□□□ 1.05
VPS51-213ENST00000533827 CSADQ9Y600 493 aa21.62■■□□□ 1.05
VPS51-213ENST00000533827 GNAI2P04899 355 aa21.61■■□□□ 1.05
VPS51-213ENST00000533827 HNRNPUQ00839 825 aaKnown RBP eCLIP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms