RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 CCDC85CA6NKD9 419 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 SLC5A1P13866 664 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 HDLBPQ00341 1268 aaKnown RBP23.01■■□□□ 1.27
HIF3A-216ENST00000533789 RASA3Q14644 834 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 GRIK5Q16478 980 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 NBPF12Q5TAG4 269 aaPredicted RBP23.01■■□□□ 1.27
HIF3A-216ENST00000533789 SPRYD7Q5W111 196 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 LPIN2Q92539 896 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 ARHGAP45Q92619 1136 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 TDRD3Q9H7E2 651 aaKnown RBP23.01■■□□□ 1.27
HIF3A-216ENST00000533789 LRRFIP2Q9Y608 721 aaKnown RBP23.01■■□□□ 1.27
HIF3A-216ENST00000533789 DOCK2Q92608 1830 aa23.01■■□□□ 1.27
HIF3A-216ENST00000533789 CIAO1O76071 339 aa23■■□□□ 1.27
HIF3A-216ENST00000533789 MAST3O60307 1309 aa23■■□□□ 1.27
HIF3A-216ENST00000533789 IREB2P48200 963 aaKnown RBP22.99■■□□□ 1.27
HIF3A-216ENST00000533789 MEIS3Q99687 375 aa22.99■■□□□ 1.27
HIF3A-216ENST00000533789 SIL1Q9H173 461 aa22.99■■□□□ 1.27
HIF3A-216ENST00000533789 SUGT1Q9Y2Z0 365 aa22.99■■□□□ 1.27
HIF3A-216ENST00000533789 ZBTB48P10074 688 aaPredicted RBP22.98■■□□□ 1.27
HIF3A-216ENST00000533789 INTS3Q68E01 1043 aaKnown RBP22.98■■□□□ 1.27
HIF3A-216ENST00000533789 TEKT1Q969V4 418 aa22.98■■□□□ 1.27
HIF3A-216ENST00000533789 SLC10A4Q96EP9 437 aa22.98■■□□□ 1.27
HIF3A-216ENST00000533789 CLMNQ96JQ2 1002 aa22.98■■□□□ 1.27
HIF3A-216ENST00000533789 TNNI2P48788 182 aa22.97■■□□□ 1.27
HIF3A-216ENST00000533789 WNK4Q96J92 1243 aa22.97■■□□□ 1.27
HIF3A-216ENST00000533789 TEPSINQ96N21 525 aa22.97■■□□□ 1.27
HIF3A-216ENST00000533789 TCP10L2B9ZVM9 353 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 USP2O75604 605 aaPredicted RBP22.96■■□□□ 1.27
HIF3A-216ENST00000533789 TBC1D8O95759 1140 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 ATP2B3Q16720 1220 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 CTU1Q7Z7A3 348 aaKnown RBP22.96■■□□□ 1.27
HIF3A-216ENST00000533789 ZDHHC15Q96MV8 337 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 MRIQ9BWK5 157 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 CFHR5Q9BXR6 569 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 CEP126Q9P2H0 1117 aa22.96■■□□□ 1.27
HIF3A-216ENST00000533789 MANSC4A6NHS7 340 aaPredicted RBP22.95■■□□□ 1.26
HIF3A-216ENST00000533789 IL15P40933 162 aaPredicted RBP22.95■■□□□ 1.26
HIF3A-216ENST00000533789 NOM1Q5C9Z4 860 aaKnown RBP22.95■■□□□ 1.26
HIF3A-216ENST00000533789 ANKRD13AQ8IZ07 590 aa22.95■■□□□ 1.26
HIF3A-216ENST00000533789 WDR66Q8TBY9 1149 aa22.95■■□□□ 1.26
HIF3A-216ENST00000533789 TMEM39BQ9GZU3 492 aa22.95■■□□□ 1.26
HIF3A-216ENST00000533789 COPRSQ9NQ92 184 aa22.95■■□□□ 1.26
HIF3A-216ENST00000533789 GNAI3P08754 354 aa22.94■■□□□ 1.26
HIF3A-216ENST00000533789 CDAN1Q8IWY9 1227 aa22.94■■□□□ 1.26
HIF3A-216ENST00000533789 ZNF296Q8WUU4 475 aaPredicted RBP22.94■■□□□ 1.26
HIF3A-216ENST00000533789 PA2G4Q9UQ80 394 aaKnown RBP22.94■■□□□ 1.26
HIF3A-216ENST00000533789 RPAP1Q9BWH6 1393 aaPredicted RBP22.93■■□□□ 1.26
HIF3A-216ENST00000533789 IPO8O15397 1037 aaKnown RBP22.93■■□□□ 1.26
HIF3A-216ENST00000533789 ALDH1A1P00352 501 aa22.93■■□□□ 1.26
HIF3A-216ENST00000533789 TRIM27P14373 513 aa22.93■■□□□ 1.26
HIF3A-216ENST00000533789 INHBEP58166 350 aa22.93■■□□□ 1.26
HIF3A-216ENST00000533789 HHIPL2Q6UWX4 724 aa22.93■■□□□ 1.26
HIF3A-216ENST00000533789 TMOD2Q9NZR1 351 aa22.93■■□□□ 1.26
HIF3A-216ENST00000533789 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.93■■□□□ 1.26
HIF3A-216ENST00000533789 GNL3LQ9NVN8 582 aaKnown RBP22.92■■□□□ 1.26
HIF3A-216ENST00000533789 GPR25O00155 361 aa22.91■■□□□ 1.26
HIF3A-216ENST00000533789 CACNB3P54284 484 aa22.91■■□□□ 1.26
HIF3A-216ENST00000533789 MTX1Q13505 466 aa22.91■■□□□ 1.26
HIF3A-216ENST00000533789 APOBEC3HQ6NTF7 200 aaKnown RBP22.91■■□□□ 1.26
HIF3A-216ENST00000533789 ATF7IPQ6VMQ6 1270 aa22.91■■□□□ 1.26
HIF3A-216ENST00000533789 IFNL1Q8IU54 200 aa22.91■■□□□ 1.26
HIF3A-216ENST00000533789 SEMA3EO15041 775 aa22.9■■□□□ 1.26
HIF3A-216ENST00000533789 GJA5P36382 358 aa22.9■■□□□ 1.26
HIF3A-216ENST00000533789 RGS19P49795 217 aa22.9■■□□□ 1.26
HIF3A-216ENST00000533789 FKBP1CQ5VVH2 108 aa22.9■■□□□ 1.26
HIF3A-216ENST00000533789 FAM83AQ86UY5 434 aa22.9■■□□□ 1.26
HIF3A-216ENST00000533789 MYO5AQ9Y4I1 1855 aaKnown RBP22.9■■□□□ 1.26
HIF3A-216ENST00000533789 SALL1Q9NSC2 1324 aa22.89■■□□□ 1.26
HIF3A-216ENST00000533789 IGF2BP3O00425 579 aaKnown RBP eCLIP22.89■■□□□ 1.25
HIF3A-216ENST00000533789 ZBTB22O15209 634 aa22.89■■□□□ 1.25
HIF3A-216ENST00000533789 SRGAP3O43295 1099 aa22.89■■□□□ 1.25
HIF3A-216ENST00000533789 BCAR3O75815 825 aa22.89■■□□□ 1.25
HIF3A-216ENST00000533789 FRAT1Q92837 279 aaPredicted RBP22.89■■□□□ 1.25
HIF3A-216ENST00000533789 ELP3Q9H9T3 547 aa22.89■■□□□ 1.25
HIF3A-216ENST00000533789 TNRC18O15417 2968 aaPredicted RBP22.89■■□□□ 1.25
HIF3A-216ENST00000533789 MAST2Q6P0Q8 1798 aa22.89■■□□□ 1.25
HIF3A-216ENST00000533789 PDE4DIPQ5VU43 2346 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 PRDX5P30044 214 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 PHKA1P46020 1223 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.88■■□□□ 1.25
HIF3A-216ENST00000533789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.88■■□□□ 1.25
HIF3A-216ENST00000533789 R3HDMLQ9H3Y0 253 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 DENND2AQ9ULE3 1009 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 TNNQ9UQP3 1299 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 PTPRFP10586 1907 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 CDK5RAP2Q96SN8 1893 aa22.88■■□□□ 1.25
HIF3A-216ENST00000533789 RBBP6Q7Z6E9 1792 aaKnown RBP22.87■■□□□ 1.25
HIF3A-216ENST00000533789 FKTNO75072 461 aa22.87■■□□□ 1.25
HIF3A-216ENST00000533789 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
HIF3A-216ENST00000533789 VGLL4Q14135 290 aa22.87■■□□□ 1.25
HIF3A-216ENST00000533789 PKN2Q16513 984 aaKnown RBP22.87■■□□□ 1.25
HIF3A-216ENST00000533789 MIER1Q8N108 512 aa22.87■■□□□ 1.25
HIF3A-216ENST00000533789 OPTNQ96CV9 577 aa22.87■■□□□ 1.25
HIF3A-216ENST00000533789 DAGLAQ9Y4D2 1042 aa22.87■■□□□ 1.25
HIF3A-216ENST00000533789 LDHBP07195 334 aaKnown RBP22.86■■□□□ 1.25
HIF3A-216ENST00000533789 ADORA1P30542 326 aa22.86■■□□□ 1.25
HIF3A-216ENST00000533789 DIXDC1Q155Q3 683 aa22.86■■□□□ 1.25
HIF3A-216ENST00000533789 CCDC102BQ68D86 513 aa22.86■■□□□ 1.25
HIF3A-216ENST00000533789 HOOK2Q96ED9 719 aa22.86■■□□□ 1.25
HIF3A-216ENST00000533789 CSADQ9Y600 493 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms