RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 ZBED3Q96IU2 234 aaPredicted RBP21.47■■□□□ 1.03
NXF1-217ENST00000533671 PRMT6Q96LA8 375 aaPredicted RBP21.47■■□□□ 1.03
NXF1-217ENST00000533671 DBNDD2Q9BQY9 259 aa21.47■■□□□ 1.03
NXF1-217ENST00000533671 CCDC8Q9H0W5 538 aaPredicted RBP21.47■■□□□ 1.03
NXF1-217ENST00000533671 VEZTQ9HBM0 779 aa21.47■■□□□ 1.03
NXF1-217ENST00000533671 ABCF2Q9UG63 623 aa21.47■■□□□ 1.03
NXF1-217ENST00000533671 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
NXF1-217ENST00000533671 PCDHAC2Q9Y5I4 1007 aa21.47■■□□□ 1.03
NXF1-217ENST00000533671 CLRN2A0PK11 232 aa21.46■■□□□ 1.03
NXF1-217ENST00000533671 HDLBPQ00341 1268 aaKnown RBP21.46■■□□□ 1.03
NXF1-217ENST00000533671 PAXIP1Q6ZW49 1069 aaPredicted RBP21.46■■□□□ 1.03
NXF1-217ENST00000533671 AACSQ86V21 672 aa21.46■■□□□ 1.03
NXF1-217ENST00000533671 KLRG1Q96E93 195 aa21.46■■□□□ 1.03
NXF1-217ENST00000533671 CDCA5Q96FF9 252 aa21.46■■□□□ 1.03
NXF1-217ENST00000533671 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
NXF1-217ENST00000533671 SPTY2D1Q68D10 685 aaPredicted RBP21.45■■□□□ 1.02
NXF1-217ENST00000533671 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.02
NXF1-217ENST00000533671 DNAJC5GQ8N7S2 189 aa21.45■■□□□ 1.02
NXF1-217ENST00000533671 EAF2Q96CJ1 260 aaPredicted RBP21.45■■□□□ 1.02
NXF1-217ENST00000533671 PDS5AQ29RF7 1337 aaKnown RBP21.45■■□□□ 1.02
NXF1-217ENST00000533671 SALL1Q9NSC2 1324 aa21.45■■□□□ 1.02
NXF1-217ENST00000533671 ZBTB22O15209 634 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 ARID4AP29374 1257 aaPredicted RBP21.44■■□□□ 1.02
NXF1-217ENST00000533671 PRDX5P30044 214 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 NF2P35240 595 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 DEFB115Q30KQ5 88 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 C2orf69Q8N8R5 385 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 SPATA5Q8NB90 893 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 TDRD3Q9H7E2 651 aaKnown RBP21.44■■□□□ 1.02
NXF1-217ENST00000533671 HMG20BQ9P0W2 317 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 SUPT16HQ9Y5B9 1047 aaKnown RBP21.44■■□□□ 1.02
NXF1-217ENST00000533671 MYH2Q9UKX2 1941 aa21.44■■□□□ 1.02
NXF1-217ENST00000533671 ERICH6Q7L0X2 663 aa21.43■■□□□ 1.02
NXF1-217ENST00000533671 DZIP1Q86YF9 867 aaKnown RBP21.43■■□□□ 1.02
NXF1-217ENST00000533671 MRIQ9BWK5 157 aa21.43■■□□□ 1.02
NXF1-217ENST00000533671 GBA2Q9HCG7 927 aaPredicted RBP21.43■■□□□ 1.02
NXF1-217ENST00000533671 TMOD2Q9NZR1 351 aa21.43■■□□□ 1.02
NXF1-217ENST00000533671 ZNF70Q9UC06 446 aaPredicted RBP21.43■■□□□ 1.02
NXF1-217ENST00000533671 DBNLQ9UJU6 430 aaKnown RBP21.43■■□□□ 1.02
NXF1-217ENST00000533671 IFIT2P09913 472 aaKnown RBP21.42■■□□□ 1.02
NXF1-217ENST00000533671 MCAMP43121 646 aa21.42■■□□□ 1.02
NXF1-217ENST00000533671 PRAMEF18Q5VWM3 479 aa21.42■■□□□ 1.02
NXF1-217ENST00000533671 HHIPL2Q6UWX4 724 aa21.42■■□□□ 1.02
NXF1-217ENST00000533671 TLL2Q9Y6L7 1015 aa21.42■■□□□ 1.02
NXF1-217ENST00000533671 CNTNAP1P78357 1384 aa21.41■■□□□ 1.02
NXF1-217ENST00000533671 TNFAIP1Q13829 316 aa21.41■■□□□ 1.02
NXF1-217ENST00000533671 TTLL12Q14166 644 aaPredicted RBP21.41■■□□□ 1.02
NXF1-217ENST00000533671 SLF2Q8IX21 1173 aa21.41■■□□□ 1.02
NXF1-217ENST00000533671 ZDHHC15Q96MV8 337 aa21.41■■□□□ 1.02
NXF1-217ENST00000533671 DEFB129Q9H1M3 183 aa21.41■■□□□ 1.02
NXF1-217ENST00000533671 SNRKQ9NRH2 765 aa21.41■■□□□ 1.02
NXF1-217ENST00000533671 TLR7Q9NYK1 1049 aaKnown RBP21.41■■□□□ 1.02
NXF1-217ENST00000533671 AKAP11Q9UKA4 1901 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 TNNI2P48788 182 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 GRM1Q13255 1194 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 SPDYE2Q495Y8 402 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 PI16Q6UXB8 463 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 LRRCC1Q9C099 1032 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 LRP2BPQ9P2M1 347 aa21.4■■□□□ 1.02
NXF1-217ENST00000533671 RASSF10A6NK89 507 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 HUNKP57058 714 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 DIXDC1Q155Q3 683 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 SAPCD2Q86UD0 394 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 RAI14Q9P0K7 980 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 PCDHB15Q9Y5E8 787 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 PPP2R3BQ9Y5P8 575 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 AK9Q5TCS8 1911 aa21.39■■□□□ 1.01
NXF1-217ENST00000533671 AOX1Q06278 1338 aa21.38■■□□□ 1.01
NXF1-217ENST00000533671 TCP10L2B9ZVM9 353 aa21.38■■□□□ 1.01
NXF1-217ENST00000533671 ECE1P42892 770 aa21.38■■□□□ 1.01
NXF1-217ENST00000533671 TBC1D9Q6ZT07 1266 aa21.38■■□□□ 1.01
NXF1-217ENST00000533671 ZNF512BQ96KM6 892 aaPredicted RBP21.38■■□□□ 1.01
NXF1-217ENST00000533671 GSTO1P78417 241 aa21.37■■□□□ 1.01
NXF1-217ENST00000533671 AAMPQ13685 434 aa21.37■■□□□ 1.01
NXF1-217ENST00000533671 RASA3Q14644 834 aa21.37■■□□□ 1.01
NXF1-217ENST00000533671 DCTPP1Q9H773 170 aa21.37■■□□□ 1.01
NXF1-217ENST00000533671 DAGLAQ9Y4D2 1042 aa21.37■■□□□ 1.01
NXF1-217ENST00000533671 PAPPA2Q9BXP8 1791 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 LDHCP07864 332 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 ZAP70P43403 619 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 VEGFBP49765 207 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 FKBP1BP68106 108 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 PRKG1Q13976 671 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 SUPT20HL1Q3ZLR7 823 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 CYP4F22Q6NT55 531 aa21.36■■□□□ 1.01
NXF1-217ENST00000533671 APOBEC3HQ6NTF7 200 aaKnown RBP21.36■■□□□ 1.01
NXF1-217ENST00000533671 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
NXF1-217ENST00000533671 MYO5AQ9Y4I1 1855 aaKnown RBP21.36■■□□□ 1.01
NXF1-217ENST00000533671 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
NXF1-217ENST00000533671 SMARCA5O60264 1052 aaPredicted RBP21.35■■□□□ 1.01
NXF1-217ENST00000533671 CACNB3P54284 484 aa21.35■■□□□ 1.01
NXF1-217ENST00000533671 MECOMQ03112 1051 aa21.35■■□□□ 1.01
NXF1-217ENST00000533671 ARMC9Q7Z3E5 817 aa21.35■■□□□ 1.01
NXF1-217ENST00000533671 CAPNS2Q96L46 248 aa21.35■■□□□ 1.01
NXF1-217ENST00000533671 HHIPL1Q96JK4 782 aa21.34■■□□□ 1.01
NXF1-217ENST00000533671 NOL10Q9BSC4 688 aaKnown RBP21.34■■□□□ 1.01
NXF1-217ENST00000533671 USP40Q9NVE5 1235 aa21.34■■□□□ 1.01
NXF1-217ENST00000533671 CEP350Q5VT06 3117 aa21.33■■□□□ 1.01
NXF1-217ENST00000533671 PPP1R12BO60237 982 aaPredicted RBP21.33■■□□□ 1.01
NXF1-217ENST00000533671 CYP2E1P05181 493 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms