RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SPDYE2Q495Y8 402 aa19.23■□□□□ 0.67
CPSF1-211ENST00000533492 ABHD8Q96I13 439 aa19.23■□□□□ 0.67
CPSF1-211ENST00000533492 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-211ENST00000533492 AOX1Q06278 1338 aa19.23■□□□□ 0.67
CPSF1-211ENST00000533492 IL15P40933 162 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-211ENST00000533492 HDLBPQ00341 1268 aaKnown RBP19.22■□□□□ 0.67
CPSF1-211ENST00000533492 GRIK5Q16478 980 aa19.22■□□□□ 0.67
CPSF1-211ENST00000533492 ATP2B3Q16720 1220 aa19.22■□□□□ 0.67
CPSF1-211ENST00000533492 LDLRAD1Q5T700 205 aa19.22■□□□□ 0.67
CPSF1-211ENST00000533492 NBPF12Q5TAG4 269 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-211ENST00000533492 ATF7IPQ6VMQ6 1270 aa19.22■□□□□ 0.67
CPSF1-211ENST00000533492 SLC10A4Q96EP9 437 aa19.22■□□□□ 0.67
CPSF1-211ENST00000533492 FZD1Q9UP38 647 aa19.22■□□□□ 0.67
CPSF1-211ENST00000533492 TNNI2P48788 182 aa19.21■□□□□ 0.67
CPSF1-211ENST00000533492 TEKT1Q969V4 418 aa19.21■□□□□ 0.67
CPSF1-211ENST00000533492 COPRSQ9NQ92 184 aa19.21■□□□□ 0.67
CPSF1-211ENST00000533492 GNL3LQ9NVN8 582 aaKnown RBP19.21■□□□□ 0.67
CPSF1-211ENST00000533492 PA2G4Q9UQ80 394 aaKnown RBP19.21■□□□□ 0.67
CPSF1-211ENST00000533492 SUGT1Q9Y2Z0 365 aa19.21■□□□□ 0.67
CPSF1-211ENST00000533492 TRIM27P14373 513 aa19.2■□□□□ 0.66
CPSF1-211ENST00000533492 IREB2P48200 963 aaKnown RBP19.2■□□□□ 0.66
CPSF1-211ENST00000533492 MAP3K11Q16584 847 aa19.2■□□□□ 0.66
CPSF1-211ENST00000533492 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
CPSF1-211ENST00000533492 CLUAP1Q96AJ1 413 aa19.2■□□□□ 0.66
CPSF1-211ENST00000533492 MRIQ9BWK5 157 aa19.2■□□□□ 0.66
CPSF1-211ENST00000533492 MAST3O60307 1309 aa19.2■□□□□ 0.66
CPSF1-211ENST00000533492 TCP10L2B9ZVM9 353 aa19.19■□□□□ 0.66
CPSF1-211ENST00000533492 SRGAP3O43295 1099 aa19.19■□□□□ 0.66
CPSF1-211ENST00000533492 TM4SF4P48230 202 aa19.19■□□□□ 0.66
CPSF1-211ENST00000533492 SREBF2Q12772 1141 aa19.19■□□□□ 0.66
CPSF1-211ENST00000533492 DGKZQ13574 1117 aa19.19■□□□□ 0.66
CPSF1-211ENST00000533492 ARAP2Q8WZ64 1704 aa19.18■□□□□ 0.66
CPSF1-211ENST00000533492 UNCXA6NJT0 531 aa19.18■□□□□ 0.66
CPSF1-211ENST00000533492 SPRYD7Q5W111 196 aa19.18■□□□□ 0.66
CPSF1-211ENST00000533492 ZKSCAN2Q63HK3 967 aa19.18■□□□□ 0.66
CPSF1-211ENST00000533492 MCOLN1Q9GZU1 580 aa19.18■□□□□ 0.66
CPSF1-211ENST00000533492 TMOD2Q9NZR1 351 aa19.18■□□□□ 0.66
CPSF1-211ENST00000533492 USP2O75604 605 aaPredicted RBP19.17■□□□□ 0.66
CPSF1-211ENST00000533492 GNAI2P04899 355 aa19.17■□□□□ 0.66
CPSF1-211ENST00000533492 ZDHHC15Q96MV8 337 aa19.17■□□□□ 0.66
CPSF1-211ENST00000533492 TNNQ9UQP3 1299 aa19.17■□□□□ 0.66
CPSF1-211ENST00000533492 CCDC85CA6NKD9 419 aa19.16■□□□□ 0.66
CPSF1-211ENST00000533492 ANKRD13AQ8IZ07 590 aa19.16■□□□□ 0.66
CPSF1-211ENST00000533492 CLMNQ96JQ2 1002 aa19.16■□□□□ 0.66
CPSF1-211ENST00000533492 DENND2AQ9ULE3 1009 aa19.16■□□□□ 0.66
CPSF1-211ENST00000533492 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 MANSC4A6NHS7 340 aaPredicted RBP19.15■□□□□ 0.66
CPSF1-211ENST00000533492 TBC1D8O95759 1140 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 INHBEP58166 350 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 MTX1Q13505 466 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 AKAP2Q9Y2D5 859 aa19.15■□□□□ 0.66
CPSF1-211ENST00000533492 MYH13Q9UKX3 1938 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 SEMA3EO15041 775 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 ZBTB48P10074 688 aaPredicted RBP19.14■□□□□ 0.65
CPSF1-211ENST00000533492 PHKA1P46020 1223 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 CACNB3P54284 484 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 TIMM10P62072 90 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 APOBEC3HQ6NTF7 200 aaKnown RBP19.14■□□□□ 0.65
CPSF1-211ENST00000533492 TMEM57Q8N5G2 664 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 WNK4Q96J92 1243 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 TEPSINQ96N21 525 aa19.14■□□□□ 0.65
CPSF1-211ENST00000533492 ALDH1A1P00352 501 aa19.13■□□□□ 0.65
CPSF1-211ENST00000533492 LDHBP07195 334 aaKnown RBP19.13■□□□□ 0.65
CPSF1-211ENST00000533492 TFCP2Q12800 502 aa19.13■□□□□ 0.65
CPSF1-211ENST00000533492 CCDC102BQ68D86 513 aa19.13■□□□□ 0.65
CPSF1-211ENST00000533492 ADORA1P30542 326 aa19.12■□□□□ 0.65
CPSF1-211ENST00000533492 G3BP1Q13283 466 aaKnown RBP eCLIP19.12■□□□□ 0.65
CPSF1-211ENST00000533492 FKBP1CQ5VVH2 108 aa19.12■□□□□ 0.65
CPSF1-211ENST00000533492 FAM83AQ86UY5 434 aa19.12■□□□□ 0.65
CPSF1-211ENST00000533492 CDAN1Q8IWY9 1227 aa19.12■□□□□ 0.65
CPSF1-211ENST00000533492 FTSJ3Q8IY81 847 aaKnown RBP19.12■□□□□ 0.65
CPSF1-211ENST00000533492 ZGPATQ8N5A5 531 aaKnown RBP19.12■□□□□ 0.65
CPSF1-211ENST00000533492 NEUROD6Q96NK8 337 aa19.12■□□□□ 0.65
CPSF1-211ENST00000533492 A0A1B0GUL7 405 aa19.11■□□□□ 0.65
CPSF1-211ENST00000533492 PRDX5P30044 214 aa19.11■□□□□ 0.65
CPSF1-211ENST00000533492 MAP3K9P80192 1104 aa19.11■□□□□ 0.65
CPSF1-211ENST00000533492 HOOK2Q96ED9 719 aa19.11■□□□□ 0.65
CPSF1-211ENST00000533492 ELP3Q9H9T3 547 aa19.11■□□□□ 0.65
CPSF1-211ENST00000533492 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 SALL1Q9NSC2 1324 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 GPR25O00155 361 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 MVPQ14764 893 aaKnown RBP19.1■□□□□ 0.65
CPSF1-211ENST00000533492 DIXDC1Q155Q3 683 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 OTUD7BQ6GQQ9 843 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 CTU1Q7Z7A3 348 aaKnown RBP19.1■□□□□ 0.65
CPSF1-211ENST00000533492 IFNL1Q8IU54 200 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 ZNF296Q8WUU4 475 aaPredicted RBP19.1■□□□□ 0.65
CPSF1-211ENST00000533492 XAGE2Q96GT9 111 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 DAGLAQ9Y4D2 1042 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 CSADQ9Y600 493 aa19.1■□□□□ 0.65
CPSF1-211ENST00000533492 PNMA6EA0A0J9YXQ4 647 aa19.09■□□□□ 0.65
CPSF1-211ENST00000533492 GORABQ5T7V8 394 aa19.09■□□□□ 0.65
CPSF1-211ENST00000533492 OPTNQ96CV9 577 aa19.09■□□□□ 0.65
CPSF1-211ENST00000533492 NOM1Q5C9Z4 860 aaKnown RBP19.08■□□□□ 0.64
CPSF1-211ENST00000533492 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.08■□□□□ 0.64
CPSF1-211ENST00000533492 ITPRIPQ8IWB1 547 aa19.08■□□□□ 0.64
CPSF1-211ENST00000533492 ABCF2Q9UG63 623 aa19.08■□□□□ 0.64
CPSF1-211ENST00000533492 ZBTB22O15209 634 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms