RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 SLF2Q8IX21 1173 aa25.65■■□□□ 1.7
VPS51-211ENST00000533487 TEKT1Q969V4 418 aa25.65■■□□□ 1.7
VPS51-211ENST00000533487 SPDYE2BA6NHP3 402 aa25.64■■□□□ 1.7
VPS51-211ENST00000533487 F8W031 263 aaPredicted RBP25.64■■□□□ 1.7
VPS51-211ENST00000533487 APBB1O00213 710 aa25.64■■□□□ 1.7
VPS51-211ENST00000533487 SPDYE6P0CI01 402 aa25.64■■□□□ 1.7
VPS51-211ENST00000533487 HSPA6P17066 643 aa25.64■■□□□ 1.7
VPS51-211ENST00000533487 MCAMP43121 646 aa25.64■■□□□ 1.7
VPS51-211ENST00000533487 CFAP100Q494V2 611 aa25.64■■□□□ 1.7
VPS51-211ENST00000533487 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
VPS51-211ENST00000533487 APOBEC3FQ8IUX4 373 aaKnown RBP25.63■■□□□ 1.69
VPS51-211ENST00000533487 SULF1Q8IWU6 871 aa25.63■■□□□ 1.69
VPS51-211ENST00000533487 ZBTB47Q9UFB7 747 aaPredicted RBP25.63■■□□□ 1.69
VPS51-211ENST00000533487 CRKP46108 304 aa25.62■■□□□ 1.69
VPS51-211ENST00000533487 APLP1P51693 650 aa25.62■■□□□ 1.69
VPS51-211ENST00000533487 ZDHHC15Q96MV8 337 aa25.62■■□□□ 1.69
VPS51-211ENST00000533487 GGA3Q9NZ52 723 aa25.62■■□□□ 1.69
VPS51-211ENST00000533487 RBM5P52756 815 aaKnown RBP eCLIP25.61■■□□□ 1.69
VPS51-211ENST00000533487 NBPF9Q3BBW0 867 aa25.61■■□□□ 1.69
VPS51-211ENST00000533487 ERICH6Q7L0X2 663 aa25.61■■□□□ 1.69
VPS51-211ENST00000533487 KRT26Q7Z3Y9 468 aa25.61■■□□□ 1.69
VPS51-211ENST00000533487 TLR7Q9NYK1 1049 aaKnown RBP25.61■■□□□ 1.69
VPS51-211ENST00000533487 ANGEL2Q5VTE6 544 aaKnown RBP25.6■■□□□ 1.69
VPS51-211ENST00000533487 GPATCH3Q96I76 525 aa25.6■■□□□ 1.69
VPS51-211ENST00000533487 ABCF2Q9UG63 623 aa25.6■■□□□ 1.69
VPS51-211ENST00000533487 MYH2Q9UKX2 1941 aa25.6■■□□□ 1.69
VPS51-211ENST00000533487 PRDX5P30044 214 aa25.59■■□□□ 1.69
VPS51-211ENST00000533487 GSTO1P78417 241 aa25.59■■□□□ 1.69
VPS51-211ENST00000533487 TNFAIP1Q13829 316 aa25.59■■□□□ 1.69
VPS51-211ENST00000533487 DZIP1Q86YF9 867 aaKnown RBP25.59■■□□□ 1.69
VPS51-211ENST00000533487 FAM163AQ96GL9 167 aaPredicted RBP25.59■■□□□ 1.69
VPS51-211ENST00000533487 PPP2R3BQ9Y5P8 575 aa25.59■■□□□ 1.69
VPS51-211ENST00000533487 MAST2Q6P0Q8 1798 aa25.59■■□□□ 1.69
VPS51-211ENST00000533487 LDHCP07864 332 aa25.58■■□□□ 1.69
VPS51-211ENST00000533487 TTF1Q15361 905 aaPredicted RBP25.58■■□□□ 1.69
VPS51-211ENST00000533487 GRIK5Q16478 980 aa25.58■■□□□ 1.69
VPS51-211ENST00000533487 SMC5Q8IY18 1101 aa25.58■■□□□ 1.69
VPS51-211ENST00000533487 PRMT6Q96LA8 375 aaPredicted RBP25.58■■□□□ 1.69
VPS51-211ENST00000533487 ATP5JP18859 108 aa25.57■■□□□ 1.68
VPS51-211ENST00000533487 SPDYE2Q495Y8 402 aa25.57■■□□□ 1.68
VPS51-211ENST00000533487 FKBP1CQ5VVH2 108 aa25.57■■□□□ 1.68
VPS51-211ENST00000533487 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
VPS51-211ENST00000533487 GLIS2Q9BZE0 524 aaPredicted RBP25.56■■□□□ 1.68
VPS51-211ENST00000533487 CREBZFQ9NS37 354 aa25.56■■□□□ 1.68
VPS51-211ENST00000533487 LRP2BPQ9P2M1 347 aa25.56■■□□□ 1.68
VPS51-211ENST00000533487 DOCK2Q92608 1830 aa25.56■■□□□ 1.68
VPS51-211ENST00000533487 PI16Q6UXB8 463 aa25.55■■□□□ 1.68
VPS51-211ENST00000533487 USP48Q86UV5 1035 aa25.55■■□□□ 1.68
VPS51-211ENST00000533487 TMOD2Q9NZR1 351 aa25.55■■□□□ 1.68
VPS51-211ENST00000533487 GAKO14976 1311 aa25.55■■□□□ 1.68
VPS51-211ENST00000533487 TMEM88BA6NKF7 163 aa25.54■■□□□ 1.68
VPS51-211ENST00000533487 CYP2E1P05181 493 aaPredicted RBP25.54■■□□□ 1.68
VPS51-211ENST00000533487 ECHDC1Q9NTX5 307 aa25.54■■□□□ 1.68
VPS51-211ENST00000533487 TTC41PQ6P2S7 1318 aa25.54■■□□□ 1.68
VPS51-211ENST00000533487 SMARCA5O60264 1052 aaPredicted RBP25.53■■□□□ 1.68
VPS51-211ENST00000533487 ZAP70P43403 619 aa25.53■■□□□ 1.68
VPS51-211ENST00000533487 TNNI2P48788 182 aa25.53■■□□□ 1.68
VPS51-211ENST00000533487 APOBEC3HQ6NTF7 200 aaKnown RBP25.53■■□□□ 1.68
VPS51-211ENST00000533487 NSUN4Q96CB9 384 aaKnown RBP25.53■■□□□ 1.68
VPS51-211ENST00000533487 RAI14Q9P0K7 980 aa25.53■■□□□ 1.68
VPS51-211ENST00000533487 ZNF70Q9UC06 446 aaPredicted RBP25.53■■□□□ 1.68
VPS51-211ENST00000533487 DAGLAQ9Y4D2 1042 aa25.53■■□□□ 1.68
VPS51-211ENST00000533487 ASTN2O75129 1339 aaPredicted RBP25.53■■□□□ 1.68
VPS51-211ENST00000533487 MECOMQ03112 1051 aa25.52■■□□□ 1.68
VPS51-211ENST00000533487 ANKRD45Q5TZF3 282 aa25.52■■□□□ 1.68
VPS51-211ENST00000533487 CERS3Q8IU89 383 aa25.52■■□□□ 1.68
VPS51-211ENST00000533487 SNRKQ9NRH2 765 aa25.52■■□□□ 1.68
VPS51-211ENST00000533487 IRX6P78412 446 aaPredicted RBP25.51■■□□□ 1.67
VPS51-211ENST00000533487 MAP3K12Q12852 859 aa25.51■■□□□ 1.67
VPS51-211ENST00000533487 HAUS7Q99871 368 aa25.51■■□□□ 1.67
VPS51-211ENST00000533487 MROH7-TTC4A0A0A0MT08 1334 aa25.51■■□□□ 1.67
VPS51-211ENST00000533487 MYO5AQ9Y4I1 1855 aaKnown RBP25.51■■□□□ 1.67
VPS51-211ENST00000533487 ERC2O15083 957 aa25.5■■□□□ 1.67
VPS51-211ENST00000533487 NF2P35240 595 aa25.5■■□□□ 1.67
VPS51-211ENST00000533487 FKBP1BP68106 108 aa25.5■■□□□ 1.67
VPS51-211ENST00000533487 DIXDC1Q155Q3 683 aa25.5■■□□□ 1.67
VPS51-211ENST00000533487 TBC1D9Q6ZT07 1266 aa25.5■■□□□ 1.67
VPS51-211ENST00000533487 FAM83AQ86UY5 434 aa25.5■■□□□ 1.67
VPS51-211ENST00000533487 TDRD3Q9H7E2 651 aaKnown RBP25.5■■□□□ 1.67
VPS51-211ENST00000533487 GPR75-ASB3A0A0A6YYF3 556 aa25.49■■□□□ 1.67
VPS51-211ENST00000533487 ADM5C9JUS6 153 aa25.49■■□□□ 1.67
VPS51-211ENST00000533487 TRAF5O00463 557 aa25.49■■□□□ 1.67
VPS51-211ENST00000533487 NAA16Q6N069 864 aaPredicted RBP25.49■■□□□ 1.67
VPS51-211ENST00000533487 DEFB129Q9H1M3 183 aa25.49■■□□□ 1.67
VPS51-211ENST00000533487 VEZTQ9HBM0 779 aa25.49■■□□□ 1.67
VPS51-211ENST00000533487 PCDHAC2Q9Y5I4 1007 aa25.49■■□□□ 1.67
VPS51-211ENST00000533487 CLRN2A0PK11 232 aa25.48■■□□□ 1.67
VPS51-211ENST00000533487 CELF2O95319 508 aaKnown RBP25.48■■□□□ 1.67
VPS51-211ENST00000533487 IGHDP01880 384 aa25.48■■□□□ 1.67
VPS51-211ENST00000533487 PLCG2P16885 1265 aa25.48■■□□□ 1.67
VPS51-211ENST00000533487 CDCA5Q96FF9 252 aa25.48■■□□□ 1.67
VPS51-211ENST00000533487 NOL10Q9BSC4 688 aaKnown RBP25.48■■□□□ 1.67
VPS51-211ENST00000533487 BAG3O95817 575 aa25.47■■□□□ 1.67
VPS51-211ENST00000533487 SUPT20HL1Q3ZLR7 823 aa25.47■■□□□ 1.67
VPS51-211ENST00000533487 CST9Q5W186 159 aa25.47■■□□□ 1.67
VPS51-211ENST00000533487 HHIPL1Q96JK4 782 aa25.47■■□□□ 1.67
VPS51-211ENST00000533487 PIH1D3Q9NQM4 214 aaKnown RBP25.47■■□□□ 1.67
VPS51-211ENST00000533487 PAG1Q9NWQ8 432 aa25.47■■□□□ 1.67
VPS51-211ENST00000533487 PAPPA2Q9BXP8 1791 aa25.46■■□□□ 1.67
VPS51-211ENST00000533487 RPAP1Q9BWH6 1393 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms