RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 TAF5LO75529 589 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 VGLL4Q14135 290 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 MTFR1Q15390 333 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 ZNF804AQ7Z570 1209 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
NXF1-215ENST00000533440 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
NXF1-215ENST00000533440 SPDYE5A6NIY4 337 aa10□□□□□ -0.81
NXF1-215ENST00000533440 RBM5P52756 815 aaKnown RBP eCLIP10□□□□□ -0.81
NXF1-215ENST00000533440 C1QBPQ07021 282 aaKnown RBP10□□□□□ -0.81
NXF1-215ENST00000533440 GCKRQ14397 625 aa10□□□□□ -0.81
NXF1-215ENST00000533440 KIF22Q14807 665 aa10□□□□□ -0.81
NXF1-215ENST00000533440 WDR43Q15061 677 aaKnown RBP eCLIP10□□□□□ -0.81
NXF1-215ENST00000533440 TSPYL6Q8N831 410 aa10□□□□□ -0.81
NXF1-215ENST00000533440 DPF3Q92784 378 aa10□□□□□ -0.81
NXF1-215ENST00000533440 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
NXF1-215ENST00000533440 FAM205AQ6ZU69 1335 aa10□□□□□ -0.81
NXF1-215ENST00000533440 MYBBP1AQ9BQG0 1328 aaKnown RBP10□□□□□ -0.81
NXF1-215ENST00000533440 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 A0A1B0GUL6 1792 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 ANKRD18BA2A2Z9 1011 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 WDHD1O75717 1129 aaPredicted RBP9.99□□□□□ -0.81
NXF1-215ENST00000533440 CETPP11597 493 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 GJA8P48165 433 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
NXF1-215ENST00000533440 C17orf99Q6UX52 265 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
NXF1-215ENST00000533440 NKX2-3Q8TAU0 364 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 TMEM39BQ9GZU3 492 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 TDRD3Q9H7E2 651 aaKnown RBP9.99□□□□□ -0.81
NXF1-215ENST00000533440 SRRDQ9UH36 339 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 JAG2Q9Y219 1238 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 CSADQ9Y600 493 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 ARAP2Q8WZ64 1704 aa9.99□□□□□ -0.81
NXF1-215ENST00000533440 A0A1W2PPC1 479 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 GJB1P08034 283 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 CTGFP29279 349 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 G2E3Q7L622 706 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
NXF1-215ENST00000533440 TDRD7Q8NHU6 1098 aaKnown RBP9.98□□□□□ -0.81
NXF1-215ENST00000533440 HTATIP2Q9BUP3 242 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 TTF2Q9UNY4 1162 aaKnown RBP9.98□□□□□ -0.81
NXF1-215ENST00000533440 SNCAIPQ9Y6H5 919 aa9.98□□□□□ -0.81
NXF1-215ENST00000533440 TCP10L2B9ZVM9 353 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 IRF6O14896 467 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 ZBTB7BO15156 539 aaPredicted RBP9.97□□□□□ -0.81
NXF1-215ENST00000533440 GRK4P32298 578 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 TNNI2P48788 182 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 SNAPC2Q13487 334 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 MFSD14BQ5SR56 506 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 TRIM47Q96LD4 638 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 STK31Q9BXU1 1019 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 NR2E3Q9Y5X4 410 aa9.97□□□□□ -0.81
NXF1-215ENST00000533440 SOX1O00570 391 aaPredicted RBP9.96□□□□□ -0.82
NXF1-215ENST00000533440 APAF1O14727 1248 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 CCL5P13501 91 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 OSBPP22059 807 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 HOXD10P28358 340 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 PSMC4P43686 418 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 CRKP46108 304 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 FOXO4P98177 505 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.82
NXF1-215ENST00000533440 PPIL2Q13356 520 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 ADGRA2Q96PE1 1338 aa9.96□□□□□ -0.82
NXF1-215ENST00000533440 MNX1P50219 401 aaPredicted RBP9.95□□□□□ -0.82
NXF1-215ENST00000533440 ANKRD23Q86SG2 305 aa9.95□□□□□ -0.82
NXF1-215ENST00000533440 RAET1EQ8TD07 263 aa9.95□□□□□ -0.82
NXF1-215ENST00000533440 ZKSCAN4Q969J2 545 aaPredicted RBP9.95□□□□□ -0.82
NXF1-215ENST00000533440 WRNIP1Q96S55 665 aa9.95□□□□□ -0.82
NXF1-215ENST00000533440 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
NXF1-215ENST00000533440 CPA4Q9UI42 421 aa9.95□□□□□ -0.82
NXF1-215ENST00000533440 UNC80Q8N2C7 3258 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 MYPNQ86TC9 1320 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 FARP2O94887 1054 aaPredicted RBP9.94□□□□□ -0.82
NXF1-215ENST00000533440 HIBADHP31937 336 aaKnown RBP9.94□□□□□ -0.82
NXF1-215ENST00000533440 UBXN2AP68543 259 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 HDLBPQ00341 1268 aaKnown RBP9.94□□□□□ -0.82
NXF1-215ENST00000533440 PPATQ06203 517 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 FLIIQ13045 1269 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 GRIK5Q16478 980 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 LDHAL6AQ6ZMR3 332 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 FAM83AQ86UY5 434 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 U2AF1L4Q8WU68 220 aaKnown RBP9.94□□□□□ -0.82
NXF1-215ENST00000533440 DNAAF4Q8WXU2 420 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
NXF1-215ENST00000533440 FAM84BQ96KN1 310 aaPredicted RBP9.94□□□□□ -0.82
NXF1-215ENST00000533440 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
NXF1-215ENST00000533440 PDHXO00330 501 aa9.93□□□□□ -0.82
NXF1-215ENST00000533440 PLIN1O60240 522 aa9.93□□□□□ -0.82
NXF1-215ENST00000533440 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
NXF1-215ENST00000533440 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
NXF1-215ENST00000533440 SGPL1O95470 568 aa9.93□□□□□ -0.82
NXF1-215ENST00000533440 CAPN2P17655 700 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms