RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
CAPN1-224ENST00000533129 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
CAPN1-224ENST00000533129 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-224ENST00000533129 NEDD4P46934 1319 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 ZBTB22O15209 634 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-224ENST00000533129 EXOSC10Q01780 885 aaKnown RBP17.13■□□□□ 0.33
CAPN1-224ENST00000533129 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 TMCO3Q6UWJ1 677 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 UBXN4Q92575 508 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 COPRSQ9NQ92 184 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-224ENST00000533129 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
CAPN1-224ENST00000533129 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 NDUFA8P51970 172 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 TNNI3KQ59H18 835 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 MYD88Q99836 296 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 FPGT-TNNI3KV9GXZ4 949 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 NLRP12P59046 1061 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 SEC62Q99442 399 aaKnown RBP17.12■□□□□ 0.33
CAPN1-224ENST00000533129 HAUS7Q99871 368 aa17.12■□□□□ 0.33
CAPN1-224ENST00000533129 TPM1P09493 284 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 TEX35Q5T0J7 233 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-224ENST00000533129 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 IKBKBO14920 756 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 GCKRQ14397 625 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 NCAPHQ15003 741 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 LINC00301Q8NCQ3 95 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 YEATS4O95619 227 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
CAPN1-224ENST00000533129 DNAI1Q9UI46 699 aa17.11■□□□□ 0.33
CAPN1-224ENST00000533129 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
CAPN1-224ENST00000533129 EFCAB8A8MWE9 144 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 TADA3O75528 432 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 A1BGP04217 495 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
CAPN1-224ENST00000533129 DSCC1Q9BVC3 393 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 TSPYL1Q9H0U9 437 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
CAPN1-224ENST00000533129 STK38Q15208 465 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 MNS1Q8NEH6 495 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-224ENST00000533129 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
CAPN1-224ENST00000533129 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
CAPN1-224ENST00000533129 GUCY1B3Q02153 619 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
CAPN1-224ENST00000533129 CCDC158Q5M9N0 1113 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 TRIM65Q6PJ69 517 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 FCHSD1Q86WN1 690 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 TICAM2Q86XR7 235 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 KBTBD3Q8NAB2 608 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 NCOA5Q9HCD5 579 aaKnown RBP17.09■□□□□ 0.33
CAPN1-224ENST00000533129 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
CAPN1-224ENST00000533129 FANCCQ00597 558 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 LRRFIP1Q32MZ4 808 aaKnown RBP17.09■□□□□ 0.33
CAPN1-224ENST00000533129 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 UBXN6Q9BZV1 441 aa17.09■□□□□ 0.33
CAPN1-224ENST00000533129 STARD3NLO95772 234 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 CHGBP05060 677 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.33
CAPN1-224ENST00000533129 TFCP2Q12800 502 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 VPS72Q15906 364 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 C8orf37Q96NL8 207 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 TMX1Q9H3N1 280 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 BCL9LQ86UU0 1499 aa17.08■□□□□ 0.33
CAPN1-224ENST00000533129 DNAJC10Q8IXB1 793 aa17.08■□□□□ 0.32
CAPN1-224ENST00000533129 FBXL16Q8N461 479 aa17.08■□□□□ 0.32
CAPN1-224ENST00000533129 NGLY1Q96IV0 654 aa17.08■□□□□ 0.32
CAPN1-224ENST00000533129 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.32
CAPN1-224ENST00000533129 FDPSP14324 419 aaKnown RBP17.07■□□□□ 0.32
CAPN1-224ENST00000533129 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
CAPN1-224ENST00000533129 TXLNBQ8N3L3 684 aa17.07■□□□□ 0.32
CAPN1-224ENST00000533129 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
CAPN1-224ENST00000533129 E7EWF7 191 aa17.07■□□□□ 0.32
CAPN1-224ENST00000533129 SPTLC2O15270 562 aa17.07■□□□□ 0.32
CAPN1-224ENST00000533129 CBFA2T2O43439 604 aa17.07■□□□□ 0.32
CAPN1-224ENST00000533129 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
CAPN1-224ENST00000533129 DDX46Q7L014 1031 aaKnown RBP17.07■□□□□ 0.32
CAPN1-224ENST00000533129 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
CAPN1-224ENST00000533129 ZNF202O95125 648 aa17.06■□□□□ 0.32
CAPN1-224ENST00000533129 CAPN2P17655 700 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms