RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 LSG1Q9H089 658 aaKnown RBP22.19■■□□□ 1.14
SMPD1-208ENST00000533123 ZNF532Q9HCE3 1301 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 ZMYM1Q5SVZ6 1142 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 VPS33BQ9H267 617 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 COL4A5P29400 1685 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 SCN9AQ15858 1988 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 YDJCA8MPS7 323 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 ZGPATQ8N5A5 531 aaKnown RBP22.18■■□□□ 1.14
SMPD1-208ENST00000533123 OSBP2Q969R2 916 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 MXD3Q9BW11 206 aa22.18■■□□□ 1.14
SMPD1-208ENST00000533123 RAD50Q92878 1312 aa22.17■■□□□ 1.14
SMPD1-208ENST00000533123 TCRBV5S4A2TA0A5A2 114 aa22.17■■□□□ 1.14
SMPD1-208ENST00000533123 UBE3CQ15386 1083 aa22.17■■□□□ 1.14
SMPD1-208ENST00000533123 CCDC129Q6ZRS4 1044 aa22.17■■□□□ 1.14
SMPD1-208ENST00000533123 ARHGAP27Q6ZUM4 889 aa22.17■■□□□ 1.14
SMPD1-208ENST00000533123 ZNF589Q86UQ0 364 aaPredicted RBP22.17■■□□□ 1.14
SMPD1-208ENST00000533123 LDHBP07195 334 aaKnown RBP22.16■■□□□ 1.14
SMPD1-208ENST00000533123 YBX3P16989 372 aaKnown RBP eCLIP22.16■■□□□ 1.14
SMPD1-208ENST00000533123 MCMDC2Q4G0Z9 681 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 ZNF384Q8TF68 577 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 APPBP2Q92624 585 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 PUS7LQ9H0K6 701 aaKnown RBP22.16■■□□□ 1.14
SMPD1-208ENST00000533123 MCCP23508 829 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 MECOMQ03112 1051 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 SPTY2D1Q68D10 685 aaPredicted RBP22.16■■□□□ 1.14
SMPD1-208ENST00000533123 TBC1D22AQ8WUA7 517 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 NSUN4Q96CB9 384 aaKnown RBP22.16■■□□□ 1.14
SMPD1-208ENST00000533123 HELLSQ9NRZ9 838 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 LTBP3Q9NS15 1303 aa22.16■■□□□ 1.14
SMPD1-208ENST00000533123 PRELPP51888 382 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 CERS5Q8N5B7 392 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 MAST3O60307 1309 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 M0R2C6 588 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 STRIP1Q5VSL9 837 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 KIAA1211Q6ZU35 1233 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 NIM1KQ8IY84 436 aa22.15■■□□□ 1.14
SMPD1-208ENST00000533123 USP17L3A6NCW0 530 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 USP17L4A6NCW7 530 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 CYP7A1P22680 504 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 HSPA4P34932 840 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 PTH1RQ03431 593 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 NAA16Q6N069 864 aaPredicted RBP22.14■■□□□ 1.14
SMPD1-208ENST00000533123 USP17L1Q7RTZ2 530 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 ADGRA1Q86SQ6 560 aa22.14■■□□□ 1.14
SMPD1-208ENST00000533123 DZIP1Q86YF9 867 aaKnown RBP22.14■■□□□ 1.14
SMPD1-208ENST00000533123 DACT2Q5SW24 774 aa22.13■■□□□ 1.13
SMPD1-208ENST00000533123 JDP2Q8WYK2 163 aa22.13■■□□□ 1.13
SMPD1-208ENST00000533123 ZNRF3Q9ULT6 936 aa22.13■■□□□ 1.13
SMPD1-208ENST00000533123 K7ELQ4 463 aaPredicted RBP22.12■■□□□ 1.13
SMPD1-208ENST00000533123 EPB41L2O43491 1005 aaKnown RBP22.12■■□□□ 1.13
SMPD1-208ENST00000533123 RAD17O75943 681 aa22.12■■□□□ 1.13
SMPD1-208ENST00000533123 F8W031 263 aaPredicted RBP22.12■■□□□ 1.13
SMPD1-208ENST00000533123 MIGA1Q8NAN2 632 aa22.12■■□□□ 1.13
SMPD1-208ENST00000533123 CCDC88AQ3V6T2 1871 aa22.12■■□□□ 1.13
SMPD1-208ENST00000533123 DIXDC1Q155Q3 683 aa22.11■■□□□ 1.13
SMPD1-208ENST00000533123 CCDC171Q6TFL3 1326 aa22.11■■□□□ 1.13
SMPD1-208ENST00000533123 ANAPC15P60006 121 aa22.11■■□□□ 1.13
SMPD1-208ENST00000533123 GPAA1O43292 621 aa22.1■■□□□ 1.13
SMPD1-208ENST00000533123 VPS53Q5VIR6 699 aa22.1■■□□□ 1.13
SMPD1-208ENST00000533123 AIDAQ96BJ3 306 aa22.1■■□□□ 1.13
SMPD1-208ENST00000533123 PSMD14O00487 310 aa22.09■■□□□ 1.13
SMPD1-208ENST00000533123 RASEFQ8IZ41 740 aa22.09■■□□□ 1.13
SMPD1-208ENST00000533123 TTF2Q9UNY4 1162 aaKnown RBP22.09■■□□□ 1.13
SMPD1-208ENST00000533123 ST18O60284 1047 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 MBD4O95243 580 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 NEK4P51957 841 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 GPR162Q16538 588 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 KIAA0825Q8IV33 1275 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 SUGT1Q9Y2Z0 365 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 CXCL9Q07325 125 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 IL17RAQ96F46 866 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 ARMT1Q9H993 441 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 SNX14Q9Y5W7 946 aa22.08■■□□□ 1.13
SMPD1-208ENST00000533123 ZNF646O15015 1829 aaPredicted RBP22.07■■□□□ 1.12
SMPD1-208ENST00000533123 FKBP1AP62942 108 aaKnown RBP22.07■■□□□ 1.12
SMPD1-208ENST00000533123 UPF3BQ9BZI7 483 aaKnown RBP22.07■■□□□ 1.12
SMPD1-208ENST00000533123 IGSF3O75054 1194 aa22.07■■□□□ 1.12
SMPD1-208ENST00000533123 LMNB1P20700 586 aa22.07■■□□□ 1.12
SMPD1-208ENST00000533123 SCNN1DP51172 638 aa22.07■■□□□ 1.12
SMPD1-208ENST00000533123 DYNLL1P63167 89 aaKnown RBP22.07■■□□□ 1.12
SMPD1-208ENST00000533123 GSTO1P78417 241 aa22.07■■□□□ 1.12
SMPD1-208ENST00000533123 LCORLQ8N3X6 602 aa22.07■■□□□ 1.12
SMPD1-208ENST00000533123 STRBPQ96SI9 672 aaKnown RBP22.07■■□□□ 1.12
SMPD1-208ENST00000533123 AATFQ9NY61 560 aaKnown RBP eCLIP22.07■■□□□ 1.12
SMPD1-208ENST00000533123 MYH2Q9UKX2 1941 aa22.06■■□□□ 1.12
SMPD1-208ENST00000533123 MAST2Q6P0Q8 1798 aa22.06■■□□□ 1.12
SMPD1-208ENST00000533123 MAGEB6P1A0A0J9YX57 407 aa22.06■■□□□ 1.12
SMPD1-208ENST00000533123 VIL1P09327 827 aaKnown RBP22.06■■□□□ 1.12
SMPD1-208ENST00000533123 ZBTB12Q9Y330 459 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-208ENST00000533123 HSPD1P10809 573 aaKnown RBP22.06■■□□□ 1.12
SMPD1-208ENST00000533123 RSBN1LQ6PCB5 846 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-208ENST00000533123 MAP4K1Q92918 833 aa22.06■■□□□ 1.12
SMPD1-208ENST00000533123 RIOK1Q9BRS2 568 aaKnown RBP22.06■■□□□ 1.12
SMPD1-208ENST00000533123 PSME4Q14997 1843 aa22.05■■□□□ 1.12
SMPD1-208ENST00000533123 TMED8Q6PL24 325 aaPredicted RBP22.05■■□□□ 1.12
SMPD1-208ENST00000533123 RBM8AQ9Y5S9 174 aaKnown RBP22.05■■□□□ 1.12
SMPD1-208ENST00000533123 MROH7-TTC4A0A0A0MT08 1334 aa22.05■■□□□ 1.12
SMPD1-208ENST00000533123 FOXP2O15409 715 aa22.04■■□□□ 1.12
SMPD1-208ENST00000533123 LDHCP07864 332 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms