RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 HOOK2Q96ED9 719 aa15.82■□□□□ 0.12
CAPN1-223ENST00000533079 TTF2Q9UNY4 1162 aaKnown RBP15.82■□□□□ 0.12
CAPN1-223ENST00000533079 KIAA0100Q14667 2235 aaKnown RBP15.82■□□□□ 0.12
CAPN1-223ENST00000533079 SNAP23O00161 211 aa15.81■□□□□ 0.12
CAPN1-223ENST00000533079 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-223ENST00000533079 ERO1BQ86YB8 467 aa15.81■□□□□ 0.12
CAPN1-223ENST00000533079 DZIP1LQ8IYY4 767 aaKnown RBP15.81■□□□□ 0.12
CAPN1-223ENST00000533079 HELBQ8NG08 1087 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-223ENST00000533079 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
CAPN1-223ENST00000533079 RANBP2P49792 3224 aaKnown RBP15.81■□□□□ 0.12
CAPN1-223ENST00000533079 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 ZSWIM8A7E2V4 1837 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 RPAP1Q9BWH6 1393 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-223ENST00000533079 SNAPC2Q13487 334 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 CCDC27Q2M243 656 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 G2E3Q7L622 706 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 TDRD7Q8NHU6 1098 aaKnown RBP15.8■□□□□ 0.12
CAPN1-223ENST00000533079 SH3TC2Q8TF17 1288 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
CAPN1-223ENST00000533079 FOXO4P98177 505 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
CAPN1-223ENST00000533079 UBE4AQ14139 1066 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 CCDC57Q2TAC2 916 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
CAPN1-223ENST00000533079 HTATIP2Q9BUP3 242 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 TMEM39BQ9GZU3 492 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 JAG2Q9Y219 1238 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 CHMP3Q9Y3E7 222 aa15.79■□□□□ 0.12
CAPN1-223ENST00000533079 IL16Q14005 1332 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 TCP10L2B9ZVM9 353 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 CRKP46108 304 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 PPIL2Q13356 520 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 TAF7LQ5H9L4 462 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 CDAN1Q8IWY9 1227 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 SHISA4Q96DD7 197 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 CNNM1Q9NRU3 951 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 SNCAIPQ9Y6H5 919 aa15.78■□□□□ 0.12
CAPN1-223ENST00000533079 A0A1W2PPC1 479 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 BTBD19C9JJ37 291 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 HOXD10P28358 340 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 HIBADHP31937 336 aaKnown RBP15.77■□□□□ 0.12
CAPN1-223ENST00000533079 FAM83AQ86UY5 434 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 TBC1D22AQ8WUA7 517 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 WRNIP1Q96S55 665 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 ARHGAP39Q9C0H5 1083 aa15.77■□□□□ 0.12
CAPN1-223ENST00000533079 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-223ENST00000533079 RBM27Q9P2N5 1060 aaKnown RBP15.77■□□□□ 0.12
CAPN1-223ENST00000533079 CAPN2P17655 700 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 GJA8P48165 433 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
CAPN1-223ENST00000533079 FKBP1CQ5VVH2 108 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 DCAF15Q66K64 600 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 DPF3Q92784 378 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 TMOD2Q9NZR1 351 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 SRRDQ9UH36 339 aa15.76■□□□□ 0.11
CAPN1-223ENST00000533079 MAST3O60307 1309 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 IRF6O14896 467 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 MYCP01106 439 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-223ENST00000533079 PPATQ06203 517 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 C17orf99Q6UX52 265 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 ANKRD23Q86SG2 305 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 TEKT1Q969V4 418 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 PRO3102Q9H379 93 aa15.75■□□□□ 0.11
CAPN1-223ENST00000533079 PLIN1O60240 522 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 GJB1P08034 283 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 GRK4P32298 578 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
CAPN1-223ENST00000533079 BEND3Q5T5X7 828 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 RAET1EQ8TD07 263 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-223ENST00000533079 MRIQ9BWK5 157 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 NR2E3Q9Y5X4 410 aa15.74■□□□□ 0.11
CAPN1-223ENST00000533079 MROH5Q6ZUA9 1318 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 MYPNQ86TC9 1320 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 ADGRA2Q96PE1 1338 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 GRM8O00222 908 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 PSMC4P43686 418 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 GYG1P46976 350 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 UBXN2AP68543 259 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 MTFR1Q15390 333 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 TRIM47Q96LD4 638 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 ZDHHC15Q96MV8 337 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 SUGT1Q9Y2Z0 365 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 RIPOR2Q9Y4F9 1068 aa15.73■□□□□ 0.11
CAPN1-223ENST00000533079 OSBPP22059 807 aa15.72■□□□□ 0.11
CAPN1-223ENST00000533079 VPS37DQ86XT2 251 aa15.72■□□□□ 0.11
CAPN1-223ENST00000533079 ZKSCAN4Q969J2 545 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-223ENST00000533079 ZNF594Q96JF6 807 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-223ENST00000533079 ZNF341Q9BYN7 854 aa15.72■□□□□ 0.11
CAPN1-223ENST00000533079 CCL5P13501 91 aa15.71■□□□□ 0.11
CAPN1-223ENST00000533079 CAVIN4Q5BKX8 364 aa15.71■□□□□ 0.11
CAPN1-223ENST00000533079 SLAIN1Q8ND83 568 aa15.71■□□□□ 0.11
CAPN1-223ENST00000533079 PARK7Q99497 189 aaKnown RBP15.71■□□□□ 0.11
CAPN1-223ENST00000533079 KCNH4Q9UQ05 1017 aa15.71■□□□□ 0.11
CAPN1-223ENST00000533079 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms