RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 HMMRO75330 724 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 CRKP46108 304 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 TFCP2Q12800 502 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 EXOC6Q8TAG9 804 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 DENND2AQ9ULE3 1009 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 PCDHAC2Q9Y5I4 1007 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 PDS5AQ29RF7 1337 aaKnown RBP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 SALL1Q9NSC2 1324 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 FAM155AB1AL88 458 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 NEFLP07196 543 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 TIMM10P62072 90 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 G3BP1Q13283 466 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 OS9Q13438 667 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 TNFAIP1Q13829 316 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 GRIK5Q16478 980 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 HHIPL2Q6UWX4 724 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 TEKT1Q969V4 418 aa15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 SCAF8Q9UPN6 1271 aaKnown RBP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
TRAPPC4-212ENST00000533058 A0A1B0GUL7 405 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 UNCXA6NJT0 531 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 FOXN1O15353 648 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 AOC2O75106 756 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 PHKA1P46020 1223 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 CTCFP49711 727 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 ZNF157P51786 506 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 PRAMEF18Q5VWM3 479 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 ZDHHC15Q96MV8 337 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 GPR108Q9NPR9 543 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 ZNF70Q9UC06 446 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 PAPPA2Q9BXP8 1791 aa15.95■□□□□ 0.14
TRAPPC4-212ENST00000533058 CLRN2A0PK11 232 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 CA12O43570 354 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 SLC10A3P09131 477 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 ADORA1P30542 326 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 GRM1Q13255 1194 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 MAP3K11Q16584 847 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 SUPT20HL1Q3ZLR7 823 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 XAGE2Q96GT9 111 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 PRDM10Q9NQV6 1147 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
TRAPPC4-212ENST00000533058 SURF6O75683 361 aaKnown RBP15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 RASA3Q14644 834 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 LDLRAD1Q5T700 205 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 FKBP1CQ5VVH2 108 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 ARMC9Q7Z3E5 817 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 BEGAINQ9BUH8 593 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 TDRD3Q9H7E2 651 aaKnown RBP15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 VEZTQ9HBM0 779 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 AOX1Q06278 1338 aa15.93■□□□□ 0.14
TRAPPC4-212ENST00000533058 AAMPQ13685 434 aa15.92■□□□□ 0.14
TRAPPC4-212ENST00000533058 COL13A1Q5TAT6 717 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC4-212ENST00000533058 APOBEC3HQ6NTF7 200 aaKnown RBP15.92■□□□□ 0.14
TRAPPC4-212ENST00000533058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC4-212ENST00000533058 UBE2Q2LH0YL09 131 aa15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 TNNI2P48788 182 aa15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 RASGRF1Q13972 1273 aa15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 MOB2Q70IA6 237 aa15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
TRAPPC4-212ENST00000533058 ECM29Q5VYK3 1845 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 APBB1O00213 710 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 LDHBP07195 334 aaKnown RBP15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 HSPA8P11142 646 aaKnown RBP15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 ARID4AP29374 1257 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 PRDX5P30044 214 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 TTLL12Q14166 644 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 FAM83AQ86UY5 434 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 SIRT2Q8IXJ6 389 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 ZIC5Q96T25 663 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
TRAPPC4-212ENST00000533058 HSP90AB4PQ58FF6 505 aa15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 TNNI3KQ59H18 835 aa15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 NBPF12Q5TAG4 269 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 SPTY2D1Q68D10 685 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 FAM163AQ96GL9 167 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 TEPSINQ96N21 525 aa15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 TMOD2Q9NZR1 351 aa15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 ANGEL1Q9UNK9 670 aaKnown RBP15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 FPGT-TNNI3KV9GXZ4 949 aa15.89■□□□□ 0.13
TRAPPC4-212ENST00000533058 IGSF3O75054 1194 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 UQCRFS1P1P0C7P4 283 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 LBX1P52954 281 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 ZNF512BQ96KM6 892 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 CSRNP1Q96S65 589 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 SAGE1Q9NXZ1 904 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 DAGLAQ9Y4D2 1042 aa15.88■□□□□ 0.13
TRAPPC4-212ENST00000533058 SSC5DA1L4H1 1573 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms