RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 FKTNO75072 461 aa21.47■■□□□ 1.03
RPUSD4-207ENST00000532800 PDE8BO95263 885 aa21.47■■□□□ 1.03
RPUSD4-207ENST00000532800 IREB2P48200 963 aaKnown RBP21.47■■□□□ 1.03
RPUSD4-207ENST00000532800 SLFN5Q08AF3 891 aa21.47■■□□□ 1.03
RPUSD4-207ENST00000532800 TCP10L2B9ZVM9 353 aa21.46■■□□□ 1.03
RPUSD4-207ENST00000532800 ALDH1A1P00352 501 aa21.46■■□□□ 1.03
RPUSD4-207ENST00000532800 TNFAIP1Q13829 316 aa21.46■■□□□ 1.03
RPUSD4-207ENST00000532800 CDCA7LQ96GN5 454 aa21.46■■□□□ 1.03
RPUSD4-207ENST00000532800 TEPSINQ96N21 525 aa21.46■■□□□ 1.03
RPUSD4-207ENST00000532800 HTTP42858 3142 aa21.46■■□□□ 1.03
RPUSD4-207ENST00000532800 UNCXA6NJT0 531 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 BCAMP50895 628 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 INHBEP58166 350 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 CAVIN4Q5BKX8 364 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 ANKRD13AQ8IZ07 590 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 TMEM39BQ9GZU3 492 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 MYH13Q9UKX3 1938 aa21.45■■□□□ 1.02
RPUSD4-207ENST00000532800 PDE4DIPQ5VU43 2346 aa21.44■■□□□ 1.02
RPUSD4-207ENST00000532800 FRAT2O75474 233 aaPredicted RBP21.44■■□□□ 1.02
RPUSD4-207ENST00000532800 FBXO46Q6PJ61 603 aaPredicted RBP21.44■■□□□ 1.02
RPUSD4-207ENST00000532800 ELP3Q9H9T3 547 aa21.44■■□□□ 1.02
RPUSD4-207ENST00000532800 RFX5P48382 616 aaPredicted RBP21.43■■□□□ 1.02
RPUSD4-207ENST00000532800 CACNB3P54284 484 aa21.43■■□□□ 1.02
RPUSD4-207ENST00000532800 TBC1D22AQ8WUA7 517 aa21.43■■□□□ 1.02
RPUSD4-207ENST00000532800 FGFR2P21802 821 aa21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 PUM3Q15397 648 aaKnown RBP21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 OPTNQ96CV9 577 aa21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 PTPN18Q99952 460 aa21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 SMC4Q9NTJ3 1288 aa21.42■■□□□ 1.02
RPUSD4-207ENST00000532800 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.41■■□□□ 1.02
RPUSD4-207ENST00000532800 TEKT1Q969V4 418 aa21.41■■□□□ 1.02
RPUSD4-207ENST00000532800 EYA2O00167 538 aa21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 IFIT1P09914 478 aaKnown RBP21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 TNNI2P48788 182 aa21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 HDLBPQ00341 1268 aaKnown RBP21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 CRHR2Q13324 411 aa21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 VGLL4Q14135 290 aa21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 TRIM17Q9Y577 477 aa21.4■■□□□ 1.02
RPUSD4-207ENST00000532800 KIF16BQ96L93 1317 aa21.39■■□□□ 1.01
RPUSD4-207ENST00000532800 TESPA1A2RU30 521 aaPredicted RBP21.39■■□□□ 1.01
RPUSD4-207ENST00000532800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.39■■□□□ 1.01
RPUSD4-207ENST00000532800 SLC34A2O95436 690 aa21.38■■□□□ 1.01
RPUSD4-207ENST00000532800 OTOP1Q7RTM1 612 aa21.38■■□□□ 1.01
RPUSD4-207ENST00000532800 ATG9AQ7Z3C6 839 aa21.38■■□□□ 1.01
RPUSD4-207ENST00000532800 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
RPUSD4-207ENST00000532800 MS4A4AQ96JQ5 239 aa21.38■■□□□ 1.01
RPUSD4-207ENST00000532800 ZDHHC15Q96MV8 337 aa21.38■■□□□ 1.01
RPUSD4-207ENST00000532800 CENPFP49454 3210 aa21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 SLC5A1P13866 664 aa21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 MAP3K9P80192 1104 aa21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 OTUD7BQ6GQQ9 843 aa21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 APOBEC3HQ6NTF7 200 aaKnown RBP21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 CD99L2Q8TCZ2 262 aa21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 SIL1Q9H173 461 aa21.37■■□□□ 1.01
RPUSD4-207ENST00000532800 UBTFL1P0CB47 393 aaPredicted RBP21.36■■□□□ 1.01
RPUSD4-207ENST00000532800 CAP1Q01518 475 aa21.36■■□□□ 1.01
RPUSD4-207ENST00000532800 BRI3BPQ8WY22 251 aa21.36■■□□□ 1.01
RPUSD4-207ENST00000532800 LPIN2Q92539 896 aa21.36■■□□□ 1.01
RPUSD4-207ENST00000532800 NOB1Q9ULX3 412 aaKnown RBP21.36■■□□□ 1.01
RPUSD4-207ENST00000532800 MAST3O60307 1309 aa21.35■■□□□ 1.01
RPUSD4-207ENST00000532800 OTUD5Q96G74 571 aa21.35■■□□□ 1.01
RPUSD4-207ENST00000532800 MRIQ9BWK5 157 aa21.35■■□□□ 1.01
RPUSD4-207ENST00000532800 TMOD2Q9NZR1 351 aa21.35■■□□□ 1.01
RPUSD4-207ENST00000532800 SUGT1Q9Y2Z0 365 aa21.35■■□□□ 1.01
RPUSD4-207ENST00000532800 CSADQ9Y600 493 aa21.35■■□□□ 1.01
RPUSD4-207ENST00000532800 FAM83AQ86UY5 434 aa21.34■■□□□ 1.01
RPUSD4-207ENST00000532800 ERO1AQ96HE7 468 aa21.34■■□□□ 1.01
RPUSD4-207ENST00000532800 SNCAIPQ9Y6H5 919 aa21.34■■□□□ 1.01
RPUSD4-207ENST00000532800 CCL15-CCL14A0A0B4J2E2 113 aa21.33■■□□□ 1.01
RPUSD4-207ENST00000532800 CCL15Q16663 113 aa21.33■■□□□ 1.01
RPUSD4-207ENST00000532800 HHIPL2Q6UWX4 724 aa21.33■■□□□ 1.01
RPUSD4-207ENST00000532800 WDR66Q8TBY9 1149 aa21.33■■□□□ 1.01
RPUSD4-207ENST00000532800 WRNIP1Q96S55 665 aa21.33■■□□□ 1.01
RPUSD4-207ENST00000532800 LRRFIP2Q9Y608 721 aaKnown RBP21.33■■□□□ 1.01
RPUSD4-207ENST00000532800 SPDYE5A6NIY4 337 aa21.32■■□□□ 1
RPUSD4-207ENST00000532800 PRDX5P30044 214 aa21.32■■□□□ 1
RPUSD4-207ENST00000532800 GTF2A2P52657 109 aa21.32■■□□□ 1
RPUSD4-207ENST00000532800 SP3Q02447 781 aa21.32■■□□□ 1
RPUSD4-207ENST00000532800 ATP2B3Q16720 1220 aa21.32■■□□□ 1
RPUSD4-207ENST00000532800 FAM43AQ8N2R8 423 aa21.32■■□□□ 1
RPUSD4-207ENST00000532800 ZKSCAN4Q969J2 545 aaPredicted RBP21.32■■□□□ 1
RPUSD4-207ENST00000532800 PA2G4Q9UQ80 394 aaKnown RBP21.32■■□□□ 1
RPUSD4-207ENST00000532800 RPAP1Q9BWH6 1393 aaPredicted RBP21.32■■□□□ 1
RPUSD4-207ENST00000532800 CIAO1O76071 339 aa21.31■■□□□ 1
RPUSD4-207ENST00000532800 TAF1CQ15572 869 aaPredicted RBP21.31■■□□□ 1
RPUSD4-207ENST00000532800 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
RPUSD4-207ENST00000532800 FKBP1CQ5VVH2 108 aa21.31■■□□□ 1
RPUSD4-207ENST00000532800 PTPN22Q9Y2R2 807 aa21.31■■□□□ 1
RPUSD4-207ENST00000532800 DAGLAQ9Y4D2 1042 aa21.31■■□□□ 1
RPUSD4-207ENST00000532800 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
RPUSD4-207ENST00000532800 MEIS3Q99687 375 aa21.3■■□□□ 1
RPUSD4-207ENST00000532800 API5Q9BZZ5 524 aaKnown RBP21.3■■□□□ 1
RPUSD4-207ENST00000532800 EFCC1Q9HA90 598 aa21.3■■□□□ 1
RPUSD4-207ENST00000532800 CEP126Q9P2H0 1117 aa21.3■■□□□ 1
RPUSD4-207ENST00000532800 FBXO3Q9UK99 471 aa21.3■■□□□ 1
RPUSD4-207ENST00000532800 MKI67P46013 3256 aaKnown RBP21.3■■□□□ 1
RPUSD4-207ENST00000532800 ZSWIM8A7E2V4 1837 aa21.29■■□□□ 1
RPUSD4-207ENST00000532800 AK9Q5TCS8 1911 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms