RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ZC3H15Q8WU90 426 aaKnown RBP30.36■■■□□ 2.45
USP48-214ENST00000532737 ZBED3Q96IU2 234 aaPredicted RBP30.36■■■□□ 2.45
USP48-214ENST00000532737 NBPF9Q3BBW0 867 aa30.35■■■□□ 2.45
USP48-214ENST00000532737 CFAP100Q494V2 611 aa30.35■■■□□ 2.45
USP48-214ENST00000532737 TBC1D9Q6ZT07 1266 aa30.35■■■□□ 2.45
USP48-214ENST00000532737 ABCF2Q9UG63 623 aa30.35■■■□□ 2.45
USP48-214ENST00000532737 PASKQ96RG2 1323 aa30.35■■■□□ 2.45
USP48-214ENST00000532737 MYH13Q9UKX3 1938 aa30.35■■■□□ 2.45
USP48-214ENST00000532737 WNT10BO00744 389 aa30.34■■■□□ 2.45
USP48-214ENST00000532737 LDHBP07195 334 aaKnown RBP30.34■■■□□ 2.45
USP48-214ENST00000532737 HSPA1AP0DMV8 641 aaKnown RBP30.34■■■□□ 2.45
USP48-214ENST00000532737 HSPA1BP0DMV9 641 aaKnown RBP30.34■■■□□ 2.45
USP48-214ENST00000532737 ZAP70P43403 619 aa30.34■■■□□ 2.45
USP48-214ENST00000532737 DLGAP5Q15398 846 aa30.34■■■□□ 2.45
USP48-214ENST00000532737 ZGPATQ8N5A5 531 aaKnown RBP30.34■■■□□ 2.45
USP48-214ENST00000532737 MTMR14Q8NCE2 650 aa30.34■■■□□ 2.45
USP48-214ENST00000532737 SERPINA10Q9UK55 444 aa30.34■■■□□ 2.45
USP48-214ENST00000532737 CYP2E1P05181 493 aaPredicted RBP30.32■■■□□ 2.44
USP48-214ENST00000532737 CRKP46108 304 aa30.32■■■□□ 2.44
USP48-214ENST00000532737 HDLBPQ00341 1268 aaKnown RBP30.32■■■□□ 2.44
USP48-214ENST00000532737 CNTROBQ8N137 903 aa30.32■■■□□ 2.44
USP48-214ENST00000532737 NDUFB9Q9Y6M9 179 aa30.32■■■□□ 2.44
USP48-214ENST00000532737 RBM5P52756 815 aaKnown RBP eCLIP30.31■■■□□ 2.44
USP48-214ENST00000532737 SPTY2D1Q68D10 685 aaPredicted RBP30.31■■■□□ 2.44
USP48-214ENST00000532737 PRMT6Q96LA8 375 aaPredicted RBP30.31■■■□□ 2.44
USP48-214ENST00000532737 MRIQ9BWK5 157 aa30.31■■■□□ 2.44
USP48-214ENST00000532737 MAST3O60307 1309 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 AOX1Q06278 1338 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 SPDYE2BA6NHP3 402 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 ITGBL1O95965 494 aaPredicted RBP30.3■■■□□ 2.44
USP48-214ENST00000532737 SPDYE6P0CI01 402 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 B4GALNT3Q6L9W6 998 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 OTUD7AQ8TE49 926 aaPredicted RBP30.3■■■□□ 2.44
USP48-214ENST00000532737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.3■■■□□ 2.44
USP48-214ENST00000532737 GGA3Q9NZ52 723 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 AKAP11Q9UKA4 1901 aa30.3■■■□□ 2.44
USP48-214ENST00000532737 ATP5JP18859 108 aa30.29■■■□□ 2.44
USP48-214ENST00000532737 DIXDC1Q155Q3 683 aa30.29■■■□□ 2.44
USP48-214ENST00000532737 ANGEL2Q5VTE6 544 aaKnown RBP30.29■■■□□ 2.44
USP48-214ENST00000532737 ERICH6Q7L0X2 663 aa30.29■■■□□ 2.44
USP48-214ENST00000532737 TEKT1Q969V4 418 aa30.29■■■□□ 2.44
USP48-214ENST00000532737 PIH1D3Q9NQM4 214 aaKnown RBP30.29■■■□□ 2.44
USP48-214ENST00000532737 ZBTB47Q9UFB7 747 aaPredicted RBP30.29■■■□□ 2.44
USP48-214ENST00000532737 MKRN1Q9UHC7 482 aaKnown RBP30.29■■■□□ 2.44
USP48-214ENST00000532737 ECHDC1Q9NTX5 307 aa30.28■■■□□ 2.44
USP48-214ENST00000532737 NEFLP07196 543 aa30.27■■■□□ 2.44
USP48-214ENST00000532737 HHIPL2Q6UWX4 724 aa30.27■■■□□ 2.44
USP48-214ENST00000532737 DCPSQ96C86 337 aaKnown RBP30.27■■■□□ 2.44
USP48-214ENST00000532737 GLIS2Q9BZE0 524 aaPredicted RBP30.27■■■□□ 2.44
USP48-214ENST00000532737 BOLA2Q9H3K6 86 aa30.27■■■□□ 2.44
USP48-214ENST00000532737 ANTXR1Q9H6X2 564 aa30.27■■■□□ 2.44
USP48-214ENST00000532737 LRP2BPQ9P2M1 347 aa30.27■■■□□ 2.44
USP48-214ENST00000532737 CNTNAP1P78357 1384 aa30.27■■■□□ 2.44
USP48-214ENST00000532737 DZIP1Q86YF9 867 aaKnown RBP30.26■■■□□ 2.43
USP48-214ENST00000532737 ZNF384Q8TF68 577 aa30.26■■■□□ 2.43
USP48-214ENST00000532737 ZDHHC15Q96MV8 337 aa30.26■■■□□ 2.43
USP48-214ENST00000532737 LNPKQ9C0E8 428 aa30.26■■■□□ 2.43
USP48-214ENST00000532737 RAI14Q9P0K7 980 aa30.26■■■□□ 2.43
USP48-214ENST00000532737 NUCB1Q02818 461 aa30.25■■■□□ 2.43
USP48-214ENST00000532737 MECOMQ03112 1051 aa30.25■■■□□ 2.43
USP48-214ENST00000532737 TSHZ3Q63HK5 1081 aa30.25■■■□□ 2.43
USP48-214ENST00000532737 CDC37L1Q7L3B6 337 aa30.25■■■□□ 2.43
USP48-214ENST00000532737 USP48Q86UV5 1035 aa30.25■■■□□ 2.43
USP48-214ENST00000532737 TRAF5O00463 557 aa30.24■■■□□ 2.43
USP48-214ENST00000532737 FMR1Q06787 632 aaKnown RBP eCLIP30.24■■■□□ 2.431e-9■■□□□ 13.6
USP48-214ENST00000532737 APOBEC3HQ6NTF7 200 aaKnown RBP30.24■■■□□ 2.43
USP48-214ENST00000532737 DLK2Q6UY11 383 aa30.24■■■□□ 2.43
USP48-214ENST00000532737 KRT26Q7Z3Y9 468 aa30.24■■■□□ 2.43
USP48-214ENST00000532737 NSUN4Q96CB9 384 aaKnown RBP30.24■■■□□ 2.43
USP48-214ENST00000532737 DNAJC2Q99543 621 aaKnown RBP30.24■■■□□ 2.43
USP48-214ENST00000532737 TDRD3Q9H7E2 651 aaKnown RBP30.24■■■□□ 2.43
USP48-214ENST00000532737 SCAF8Q9UPN6 1271 aaKnown RBP30.24■■■□□ 2.43
USP48-214ENST00000532737 DAGLAQ9Y4D2 1042 aa30.24■■■□□ 2.43
USP48-214ENST00000532737 CLRN2A0PK11 232 aa30.23■■■□□ 2.43
USP48-214ENST00000532737 CHD1LQ86WJ1 897 aa30.23■■■□□ 2.43
USP48-214ENST00000532737 TNS4Q8IZW8 715 aa30.23■■■□□ 2.43
USP48-214ENST00000532737 EDC3Q96F86 508 aaKnown RBP30.23■■■□□ 2.43
USP48-214ENST00000532737 GPATCH3Q96I76 525 aa30.23■■■□□ 2.43
USP48-214ENST00000532737 HAUS7Q99871 368 aa30.23■■■□□ 2.43
USP48-214ENST00000532737 SALL3Q9BXA9 1300 aa30.22■■■□□ 2.43
USP48-214ENST00000532737 PITPNM2Q9BZ72 1349 aa30.22■■■□□ 2.43
USP48-214ENST00000532737 ADM5C9JUS6 153 aa30.22■■■□□ 2.43
USP48-214ENST00000532737 ZNF70Q9UC06 446 aaPredicted RBP30.22■■■□□ 2.43
USP48-214ENST00000532737 GOLIM4O00461 696 aa30.21■■■□□ 2.43
USP48-214ENST00000532737 MYO1BO43795 1136 aa30.21■■■□□ 2.43
USP48-214ENST00000532737 MX1P20591 662 aa30.21■■■□□ 2.43
USP48-214ENST00000532737 SPDYE2Q495Y8 402 aa30.21■■■□□ 2.43
USP48-214ENST00000532737 SULF1Q8IWU6 871 aa30.21■■■□□ 2.43
USP48-214ENST00000532737 FAM163AQ96GL9 167 aaPredicted RBP30.21■■■□□ 2.43
USP48-214ENST00000532737 GAKO14976 1311 aa30.21■■■□□ 2.43
USP48-214ENST00000532737 TMEM88BA6NKF7 163 aa30.2■■■□□ 2.43
USP48-214ENST00000532737 TTC41PQ6P2S7 1318 aa30.2■■■□□ 2.42
USP48-214ENST00000532737 IDH1O75874 414 aaKnown RBP30.19■■■□□ 2.42
USP48-214ENST00000532737 SLF2Q8IX21 1173 aa30.19■■■□□ 2.42
USP48-214ENST00000532737 PAG1Q9NWQ8 432 aa30.19■■■□□ 2.42
USP48-214ENST00000532737 TRPM7Q96QT4 1865 aa30.19■■■□□ 2.42
USP48-214ENST00000532737 GSTO1P78417 241 aa30.18■■■□□ 2.42
USP48-214ENST00000532737 TTF1Q15361 905 aaPredicted RBP30.18■■■□□ 2.42
USP48-214ENST00000532737 APOBEC3FQ8IUX4 373 aaKnown RBP30.18■■■□□ 2.42
USP48-214ENST00000532737 PI4K2BQ8TCG2 481 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms