RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 LRRC27Q9C0I9 530 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 SYNCQ9H7C4 482 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 ATP7BP35670 1465 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 PNMA6EA0A0J9YXQ4 647 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 CASQ1P31415 396 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 EIF6P56537 245 aaKnown RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 DHX32Q7L7V1 743 aaKnown RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 WDR66Q8TBY9 1149 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 MAST3O60307 1309 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 UBE2HP62256 183 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 STX1AQ16623 288 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 ARHGEF25Q86VW2 580 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 DDX12PQ92771 950 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 CARD10Q9BWT7 1032 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 MROH5Q6ZUA9 1318 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 TMCO5BA8MYB1 307 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 USO1O60763 962 aaKnown RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 SYKP43405 635 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 AK2P54819 239 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 USP6P35125 1406 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 STAT6P42226 847 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 NUP88Q99567 741 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-232ENST00000532649 EXOC1Q9NV70 894 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 ALDH1B1P30837 517 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 SUPT20HQ8NEM7 779 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 CPLX3Q8WVH0 158 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 CALML3P27482 149 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 TDRD12Q587J7 1177 aaKnown RBP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 TTLL7Q6ZT98 887 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 MICALCLQ6ZW33 695 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 AATFQ9NY61 560 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 AFMP43652 599 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 CTSWP56202 376 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 KCNG4Q8TDN1 519 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 PARP1P09874 1014 aaKnown RBP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 MARCKSP29966 332 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 CCDC174Q6PII3 467 aa9.91□□□□□ -0.82
CTNND1-232ENST00000532649 PRPF31Q8WWY3 499 aaKnown RBP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 V9GYY5 206 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-232ENST00000532649 UQCRHLA0A096LP55 91 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 B4E1Z4 1266 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 KIF5CO60282 957 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 KRT2P35908 639 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 PDE6BP35913 854 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 SIK1P57059 783 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 APPBP2Q92624 585 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 ZNF408Q9H9D4 720 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 CLIP2Q9UDT6 1046 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 ODF2LQ9ULJ1 636 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 CNPY2Q9Y2B0 182 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 FLAD1Q8NFF5 587 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 SH2D4AQ9H788 454 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 AATKQ6ZMQ8 1374 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 SPATA5Q8NB90 893 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 SERPINA10Q9UK55 444 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 NDUFB9Q9Y6M9 179 aa9.9□□□□□ -0.82
CTNND1-232ENST00000532649 B4DLN1 442 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 GPAA1O43292 621 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 MRPL12P52815 198 aaKnown RBP9.9□□□□□ -0.83
CTNND1-232ENST00000532649 RPS8P62241 208 aaKnown RBP9.9□□□□□ -0.83
CTNND1-232ENST00000532649 NCBP1Q09161 790 aaKnown RBP9.9□□□□□ -0.83
CTNND1-232ENST00000532649 C8orf34Q49A92 452 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 FAM114A1Q8IWE2 563 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 ALS2CR12Q96Q35 445 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 PICK1Q9NRD5 415 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 TET3O43151 1660 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 MAP3K4Q9Y6R4 1608 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 PTPDC1A2A3K4 754 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 TRIM75PA6NK02 468 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 KIF4AO95239 1232 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 NIM1KQ8IY84 436 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 ASAP1Q9ULH1 1129 aa9.9□□□□□ -0.83
CTNND1-232ENST00000532649 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
CTNND1-232ENST00000532649 ZSCAN12O43309 604 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 TRIM37O94972 964 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 ZNF772Q68DY9 489 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-232ENST00000532649 APBB1IPQ7Z5R6 666 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-232ENST00000532649 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 RBM28Q9NW13 759 aaKnown RBP9.89□□□□□ -0.83
CTNND1-232ENST00000532649 RMND1Q9NWS8 449 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 PPIP5K2O43314 1243 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 PAFAH1B1P43034 410 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 SNX16P57768 344 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 NAA15Q9BXJ9 866 aaKnown RBP9.89□□□□□ -0.83
CTNND1-232ENST00000532649 USP25Q9UHP3 1055 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 WDR17Q8IZU2 1322 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
CTNND1-232ENST00000532649 KDRP35968 1356 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms