RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 WWC3Q9ULE0 1092 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 AOX1Q06278 1338 aa15.31■□□□□ 0.04
COPB1-208ENST00000532088 SNAP23O00161 211 aa15.3■□□□□ 0.04
COPB1-208ENST00000532088 IL1R1P14778 569 aa15.3■□□□□ 0.04
COPB1-208ENST00000532088 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
COPB1-208ENST00000532088 PDS5AQ29RF7 1337 aaKnown RBP15.3■□□□□ 0.04
COPB1-208ENST00000532088 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
COPB1-208ENST00000532088 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
COPB1-208ENST00000532088 OSBPL3Q9H4L5 887 aa15.3■□□□□ 0.04
COPB1-208ENST00000532088 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
COPB1-208ENST00000532088 WTIPA6NIX2 430 aaPredicted RBP15.29■□□□□ 0.04
COPB1-208ENST00000532088 PPIP5K2O43314 1243 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 EVI5O60447 810 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 MX1P20591 662 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 LMNB1P20700 586 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 ARID4AP29374 1257 aaPredicted RBP15.29■□□□□ 0.04
COPB1-208ENST00000532088 ADORA1P30542 326 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 GORABQ5T7V8 394 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 ARHGAP27Q6ZUM4 889 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 PODNQ7Z5L7 613 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 TXNRD3Q86VQ6 643 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
COPB1-208ENST00000532088 ERC2O15083 957 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 IGSF3O75054 1194 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 ATP5JP18859 108 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 KLRK1P26718 216 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 ARSIQ5FYB1 569 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 VPS37DQ86XT2 251 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 TDRD7Q8NHU6 1098 aaKnown RBP15.28■□□□□ 0.04
COPB1-208ENST00000532088 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
COPB1-208ENST00000532088 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
COPB1-208ENST00000532088 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
COPB1-208ENST00000532088 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.04
COPB1-208ENST00000532088 TESPA1A2RU30 521 aaPredicted RBP15.27■□□□□ 0.04
COPB1-208ENST00000532088 PHKA1P46020 1223 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 GYG1P46976 350 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 BCAMP50895 628 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 PDE1AP54750 535 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 AOC3Q16853 763 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 PLEKHM2Q8IWE5 1019 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.04
COPB1-208ENST00000532088 LARGE2Q8N3Y3 721 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.04
COPB1-208ENST00000532088 DICER1Q9UPY3 1922 aaKnown RBP15.26■□□□□ 0.03
COPB1-208ENST00000532088 GLRX3O76003 335 aaKnown RBP15.26■□□□□ 0.03
COPB1-208ENST00000532088 RASSF7Q02833 373 aa15.26■□□□□ 0.03
COPB1-208ENST00000532088 NIM1KQ8IY84 436 aa15.26■□□□□ 0.03
COPB1-208ENST00000532088 JDP2Q8WYK2 163 aa15.26■□□□□ 0.03
COPB1-208ENST00000532088 GPR101Q96P66 508 aaPredicted RBP15.26■□□□□ 0.03
COPB1-208ENST00000532088 SBF1O95248 1867 aa15.25■□□□□ 0.03
COPB1-208ENST00000532088 FAM205AQ6ZU69 1335 aa15.25■□□□□ 0.03
COPB1-208ENST00000532088 ECE2O60344 883 aa15.25■□□□□ 0.03
COPB1-208ENST00000532088 FKBP1AP62942 108 aaKnown RBP15.25■□□□□ 0.03
COPB1-208ENST00000532088 PI4K2BQ8TCG2 481 aa15.25■□□□□ 0.03
COPB1-208ENST00000532088 ZNRF3Q9ULT6 936 aa15.25■□□□□ 0.03
COPB1-208ENST00000532088 SALL1Q9NSC2 1324 aa15.24■□□□□ 0.03
COPB1-208ENST00000532088 PRELPP51888 382 aa15.24■□□□□ 0.03
COPB1-208ENST00000532088 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
COPB1-208ENST00000532088 OTUD7AQ8TE49 926 aaPredicted RBP15.24■□□□□ 0.03
COPB1-208ENST00000532088 COL4A5P29400 1685 aa15.24■□□□□ 0.03
COPB1-208ENST00000532088 SRCAPQ6ZRS2 3230 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 PSME4Q14997 1843 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 FZD9O00144 591 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 MCAMP43121 646 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 RASGRF1Q13972 1273 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 STRIP1Q5VSL9 837 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
COPB1-208ENST00000532088 SPATA5Q8NB90 893 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 TBC1D22AQ8WUA7 517 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 KHSRPQ92945 711 aaKnown RBP eCLIP15.23■□□□□ 0.03
COPB1-208ENST00000532088 HAUS7Q99871 368 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 DBNDD1Q9H9R9 158 aa15.23■□□□□ 0.03
COPB1-208ENST00000532088 AKAP11Q9UKA4 1901 aa15.22■□□□□ 0.03
COPB1-208ENST00000532088 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
COPB1-208ENST00000532088 HOXB1P14653 301 aaPredicted RBP15.22■□□□□ 0.03
COPB1-208ENST00000532088 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
COPB1-208ENST00000532088 WDR66Q8TBY9 1149 aa15.22■□□□□ 0.03
COPB1-208ENST00000532088 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
COPB1-208ENST00000532088 SUGT1Q9Y2Z0 365 aa15.22■□□□□ 0.03
COPB1-208ENST00000532088 MYH13Q9UKX3 1938 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 COL1A1P02452 1464 aaPredicted RBP15.21■□□□□ 0.03
COPB1-208ENST00000532088 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 USP17L3A6NCW0 530 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 USP17L4A6NCW7 530 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 YDJCA8MPS7 323 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 MMP14P50281 582 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
COPB1-208ENST00000532088 USP17L1Q7RTZ2 530 aa15.21■□□□□ 0.03
COPB1-208ENST00000532088 CCDC88AQ3V6T2 1871 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 CHD4Q14839 1912 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 VIL1P09327 827 aaKnown RBP15.2■□□□□ 0.02
COPB1-208ENST00000532088 NUDT7P0C024 238 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
COPB1-208ENST00000532088 SCARF1Q14162 830 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 TNIP1Q15025 636 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 TTC22Q5TAA0 569 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 C9orf131Q5VYM1 1079 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 TTLL5Q6EMB2 1281 aa15.2■□□□□ 0.02
COPB1-208ENST00000532088 BOLA2Q9H3K6 86 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms