RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 WDR43Q15061 677 aaKnown RBP eCLIP10□□□□□ -0.81
NXF1-212ENST00000531872 TSPYL6Q8N831 410 aa10□□□□□ -0.81
NXF1-212ENST00000531872 DPF3Q92784 378 aa10□□□□□ -0.81
NXF1-212ENST00000531872 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
NXF1-212ENST00000531872 FAM205AQ6ZU69 1335 aa10□□□□□ -0.81
NXF1-212ENST00000531872 MYBBP1AQ9BQG0 1328 aaKnown RBP10□□□□□ -0.81
NXF1-212ENST00000531872 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 A0A1B0GUL6 1792 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 ANKRD18BA2A2Z9 1011 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 WDHD1O75717 1129 aaPredicted RBP9.99□□□□□ -0.81
NXF1-212ENST00000531872 CETPP11597 493 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 GJA8P48165 433 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
NXF1-212ENST00000531872 C17orf99Q6UX52 265 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
NXF1-212ENST00000531872 NKX2-3Q8TAU0 364 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 TMEM39BQ9GZU3 492 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 TDRD3Q9H7E2 651 aaKnown RBP9.99□□□□□ -0.81
NXF1-212ENST00000531872 SRRDQ9UH36 339 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 JAG2Q9Y219 1238 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 CSADQ9Y600 493 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 ARAP2Q8WZ64 1704 aa9.99□□□□□ -0.81
NXF1-212ENST00000531872 A0A1W2PPC1 479 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 NPM3O75607 178 aaKnown RBP9.98□□□□□ -0.81
NXF1-212ENST00000531872 GJB1P08034 283 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 CTGFP29279 349 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 G2E3Q7L622 706 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
NXF1-212ENST00000531872 TDRD7Q8NHU6 1098 aaKnown RBP9.98□□□□□ -0.81
NXF1-212ENST00000531872 HTATIP2Q9BUP3 242 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 TTF2Q9UNY4 1162 aaKnown RBP9.98□□□□□ -0.81
NXF1-212ENST00000531872 SNCAIPQ9Y6H5 919 aa9.98□□□□□ -0.81
NXF1-212ENST00000531872 TCP10L2B9ZVM9 353 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 IRF6O14896 467 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 ZBTB7BO15156 539 aaPredicted RBP9.97□□□□□ -0.81
NXF1-212ENST00000531872 GRK4P32298 578 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 TNNI2P48788 182 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 SNAPC2Q13487 334 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 MFSD14BQ5SR56 506 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 TRIM47Q96LD4 638 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 STK31Q9BXU1 1019 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 NR2E3Q9Y5X4 410 aa9.97□□□□□ -0.81
NXF1-212ENST00000531872 SOX1O00570 391 aaPredicted RBP9.96□□□□□ -0.82
NXF1-212ENST00000531872 APAF1O14727 1248 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 CCL5P13501 91 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 OSBPP22059 807 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 HOXD10P28358 340 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 PSMC4P43686 418 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 CRKP46108 304 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 FOXO4P98177 505 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.82
NXF1-212ENST00000531872 PPIL2Q13356 520 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 LINS1Q8NG48 757 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 ADGRA2Q96PE1 1338 aa9.96□□□□□ -0.82
NXF1-212ENST00000531872 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
NXF1-212ENST00000531872 MNX1P50219 401 aaPredicted RBP9.95□□□□□ -0.82
NXF1-212ENST00000531872 ANKRD23Q86SG2 305 aa9.95□□□□□ -0.82
NXF1-212ENST00000531872 RAET1EQ8TD07 263 aa9.95□□□□□ -0.82
NXF1-212ENST00000531872 ZKSCAN4Q969J2 545 aaPredicted RBP9.95□□□□□ -0.82
NXF1-212ENST00000531872 WRNIP1Q96S55 665 aa9.95□□□□□ -0.82
NXF1-212ENST00000531872 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
NXF1-212ENST00000531872 CPA4Q9UI42 421 aa9.95□□□□□ -0.82
NXF1-212ENST00000531872 UNC80Q8N2C7 3258 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 MYPNQ86TC9 1320 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 FARP2O94887 1054 aaPredicted RBP9.94□□□□□ -0.82
NXF1-212ENST00000531872 HIBADHP31937 336 aaKnown RBP9.94□□□□□ -0.82
NXF1-212ENST00000531872 UBXN2AP68543 259 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 HDLBPQ00341 1268 aaKnown RBP9.94□□□□□ -0.82
NXF1-212ENST00000531872 PPATQ06203 517 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 FLIIQ13045 1269 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 GRIK5Q16478 980 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 LDHAL6AQ6ZMR3 332 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 FAM83AQ86UY5 434 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 U2AF1L4Q8WU68 220 aaKnown RBP9.94□□□□□ -0.82
NXF1-212ENST00000531872 DNAAF4Q8WXU2 420 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
NXF1-212ENST00000531872 FAM84BQ96KN1 310 aaPredicted RBP9.94□□□□□ -0.82
NXF1-212ENST00000531872 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
NXF1-212ENST00000531872 PDHXO00330 501 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 PLIN1O60240 522 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
NXF1-212ENST00000531872 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
NXF1-212ENST00000531872 SGPL1O95470 568 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 CAPN2P17655 700 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 GYG1P46976 350 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 MOGSQ13724 837 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
NXF1-212ENST00000531872 FKBP1CQ5VVH2 108 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 GPR153Q6NV75 609 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 LMBR1LQ6UX01 489 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 TSR2Q969E8 191 aaKnown RBP9.93□□□□□ -0.82
NXF1-212ENST00000531872 HOOK2Q96ED9 719 aa9.93□□□□□ -0.82
NXF1-212ENST00000531872 ZNF594Q96JF6 807 aaPredicted RBP9.93□□□□□ -0.82
NXF1-212ENST00000531872 MRIQ9BWK5 157 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms