RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 MYO1BO43795 1136 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
USF1-210ENST00000531842 CCDC184Q52MB2 194 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 ZKSCAN4Q969J2 545 aaPredicted RBP11.47□□□□□ -0.57
USF1-210ENST00000531842 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 PUS3Q9BZE2 481 aaKnown RBP11.47□□□□□ -0.57
USF1-210ENST00000531842 TTF2Q9UNY4 1162 aaKnown RBP11.47□□□□□ -0.57
USF1-210ENST00000531842 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
USF1-210ENST00000531842 BTBD19C9JJ37 291 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 FLIIQ13045 1269 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
USF1-210ENST00000531842 MFSD14BQ5SR56 506 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 C15orf52Q6ZUT6 534 aaKnown RBP11.46□□□□□ -0.57
USF1-210ENST00000531842 DZIP1LQ8IYY4 767 aaKnown RBP11.46□□□□□ -0.57
USF1-210ENST00000531842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.57
USF1-210ENST00000531842 DNAAF4Q8WXU2 420 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 CPA4Q9UI42 421 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 DOCK3Q8IZD9 2030 aa11.46□□□□□ -0.57
USF1-210ENST00000531842 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
USF1-210ENST00000531842 CRKP46108 304 aa11.45□□□□□ -0.58
USF1-210ENST00000531842 MMP14P50281 582 aa11.45□□□□□ -0.58
USF1-210ENST00000531842 LACTBP83111 547 aaPredicted RBP11.45□□□□□ -0.58
USF1-210ENST00000531842 DPF3Q92784 378 aa11.45□□□□□ -0.58
USF1-210ENST00000531842 SOX1O00570 391 aaPredicted RBP11.44□□□□□ -0.58
USF1-210ENST00000531842 IRF6O14896 467 aa11.44□□□□□ -0.58
USF1-210ENST00000531842 GTF2A2P52657 109 aa11.44□□□□□ -0.58
USF1-210ENST00000531842 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
USF1-210ENST00000531842 CHAF1AQ13111 956 aaPredicted RBP11.44□□□□□ -0.58
USF1-210ENST00000531842 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
USF1-210ENST00000531842 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
USF1-210ENST00000531842 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
USF1-210ENST00000531842 FAM84BQ96KN1 310 aaPredicted RBP11.44□□□□□ -0.58
USF1-210ENST00000531842 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
USF1-210ENST00000531842 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 TLR2O60603 784 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
USF1-210ENST00000531842 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
USF1-210ENST00000531842 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 MIGA2Q7L4E1 593 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 LINS1Q8NG48 757 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 WRNIP1Q96S55 665 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 MYH16Q9H6N6 1097 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 CNNM1Q9NRU3 951 aa11.43□□□□□ -0.58
USF1-210ENST00000531842 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
USF1-210ENST00000531842 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
USF1-210ENST00000531842 UNCXA6NJT0 531 aa11.42□□□□□ -0.58
USF1-210ENST00000531842 INPP5BP32019 993 aa11.42□□□□□ -0.58
USF1-210ENST00000531842 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
USF1-210ENST00000531842 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
USF1-210ENST00000531842 CSADQ9Y600 493 aa11.42□□□□□ -0.58
USF1-210ENST00000531842 DLL1O00548 723 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 SLURP2P0DP57 97 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 CCL5P13501 91 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 OSBPP22059 807 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 HIBADHP31937 336 aaKnown RBP11.41□□□□□ -0.58
USF1-210ENST00000531842 PSMC4P43686 418 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 SERPINA10Q9UK55 444 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 PTPRFP10586 1907 aa11.41□□□□□ -0.58
USF1-210ENST00000531842 FANCIQ9NVI1 1328 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 CETPP11597 493 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 TNFAIP1Q13829 316 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 UBE2Q1Q7Z7E8 422 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 PRO3102Q9H379 93 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
USF1-210ENST00000531842 GABRQQ9UN88 632 aa11.4□□□□□ -0.58
USF1-210ENST00000531842 ADGRA2Q96PE1 1338 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 CYP2C8P10632 490 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 PRKCZQ05513 592 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
USF1-210ENST00000531842 MOGSQ13724 837 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 KIF22Q14807 665 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 CCDC57Q2TAC2 916 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 SLC17A8Q8NDX2 589 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 KLHDC4Q8TBB5 520 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 SRRDQ9UH36 339 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 PHIPQ8WWQ0 1821 aa11.39□□□□□ -0.59
USF1-210ENST00000531842 MYPNQ86TC9 1320 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 DOCK2Q92608 1830 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 GRM8O00222 908 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 PDHXO00330 501 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 VAMP4O75379 141 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 FMNL1O95466 1100 aaPredicted RBP11.38□□□□□ -0.59
USF1-210ENST00000531842 ELNP15502 786 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms